RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CLDN25C9JDP6 229 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 H7C1C5 153 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 SLC25A20O43772 301 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 ORC5O43913 435 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 SH2D1AO60880 128 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 ZNF705DP0CH99 300 aaPredicted RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 SMIM10L2AP0DMW4 78 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 SMIM10L2BP0DMW5 78 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 PPIBP23284 216 aaKnown RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 CRABP2P29373 138 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 ATP5G3P48201 142 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 AKR1C2P52895 323 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 TSPEAR-AS2P59090 65 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 LCN6P62502 163 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 RBX1P62877 108 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 FKBP1AP62942 108 aaKnown RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 HBA1P69905 142 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 LGALS9BQ3B8N2 356 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 LGALS9CQ6DKI2 356 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 EXOC3-AS1Q8N2X6 119 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 FAM24BQ8N5W8 94 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 RPS4Y2Q8TD47 263 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 RMND5BQ96G75 393 aaPredicted RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 TP73-AS1Q9UF72 201 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 KLK5Q9Y337 293 aaPredicted RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 HSPB11Q9Y547 144 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 SSH2Q76I76 1423 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 COL27A1Q8IZC6 1860 aaPredicted RBP3.16□□□□□ -1.9
VRK1-203ENST00000555067 IGKV1D-43A0A0B4J1Z2 117 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 A0A1W2PRE2 83 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 I3L521 148 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 NDUFC2O95298 119 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
VRK1-203ENST00000555067 NPPCP23582 126 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 RAB13P51153 203 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 TPI1P60174 286 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 LINC00483Q53H64 154 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 TMEM128Q5BJH2 165 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SAMD13Q5VXD3 122 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 AMTNQ6UX39 209 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 C16orf47Q6ZP98 133 aaPredicted RBP3.16□□□□□ -1.9
VRK1-203ENST00000555067 SPATA12Q7Z6I5 190 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 ST20-AS1Q8NBB2 130 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SLC7A6Q92536 515 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 STARD4Q96DR4 205 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 LYSMD1Q96S90 227 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SERPINI1Q99574 410 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SPIN2AQ99865 258 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SPIN2BQ9BPZ2 258 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 UPK3BQ9BT76 320 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 C20orf27Q9GZN8 174 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 C11orf1Q9H5F2 150 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 EFCAB1Q9HAE3 211 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 LRTM1Q9HBL6 345 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 SNX12Q9UMY4 172 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 NUP160Q12769 1436 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 NEO1Q92859 1461 aa3.16□□□□□ -1.9
VRK1-203ENST00000555067 ABCC12Q96J65 1359 aa3.15□□□□□ -1.9
VRK1-203ENST00000555067 TRAV9-1A0A075B6T8 112 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 SLC17A3O00476 420 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 PPBPP02775 128 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 IGLV7-43P04211 117 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 IL4P05112 153 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 CSN2P05814 226 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 IGHV3-30-3P0DP02 117 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 GZMHP20718 246 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 SERPINB10P48595 397 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 LDLRAD2Q5SZI1 272 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 SSX8Q7RTT4 187 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 DHFR2Q86XF0 187 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 ZNF695Q8IW36 515 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 SKA2Q8WVK7 121 aaPredicted RBP3.15□□□□□ -1.91
VRK1-203ENST00000555067 ACOT12Q8WYK0 555 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 C1orf50Q9BV19 199 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 CHST6Q9GZX3 395 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 ERGIC3Q9Y282 383 aa3.15□□□□□ -1.91
VRK1-203ENST00000555067 IGKV1D-37A0A075B6S9 117 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 A0A087WUU8 490 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 A8MWP6 167 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 C16orf90A8MZG2 172 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 H3BQ85 93 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 UBE2L6O14933 153 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 IGKV1-5P01602 117 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 TFPTP0C1Z6 253 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 CCL3P10147 92 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 MUC1P15941 1255 aaPredicted RBP3.14□□□□□ -1.91
VRK1-203ENST00000555067 CRABP1P29762 137 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 G6PCP35575 357 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 PSMD8P48556 350 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 RWDD2BP57060 319 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 RPL30P62888 115 aaKnown RBP3.14□□□□□ -1.91
VRK1-203ENST00000555067 Q6Q795 121 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 ZNF709Q8N972 641 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 C11orf40Q8WZ69 217 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 BORCS5Q969J3 196 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 TOMM6Q96B49 74 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms