RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 MKI67P46013 3256 aaKnown RBP2.81□□□□□ -1.96
PSEN1-211ENST00000554995 PKD1L2Q7Z442 2459 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 GOLGA6L19H0YKK7 550 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 CIAO1O76071 339 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 MT-CO2P00403 227 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 IGLV6-57P01721 117 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 RPS17P08708 135 aaKnown RBP2.81□□□□□ -1.96
PSEN1-211ENST00000554995 ESDP10768 282 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 ATP6V0CP27449 155 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 CDK9P50750 372 aaKnown RBP2.81□□□□□ -1.96
PSEN1-211ENST00000554995 TSPEAR-AS2P59090 65 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 CST6Q15828 149 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 TMEM176BQ3YBM2 270 aaPredicted RBP2.81□□□□□ -1.96
PSEN1-211ENST00000554995 C1orf194Q5T5A4 169 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 FAM78BQ5VT40 261 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 SYPL2Q5VXT5 272 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 SFXN4Q6P4A7 337 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 ZNF664Q8N3J9 261 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 OR1M1Q8NGA1 313 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 MUC7Q8TAX7 377 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 SLC35G5Q96KT7 338 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 CCDC42Q96M95 316 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 UPK3BQ9BT76 320 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 HIGD2AQ9BW72 106 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 RTL9Q8NET4 1388 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 MED23Q9ULK4 1368 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 DUOX1Q9NRD9 1551 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 BTAF1O14981 1849 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 MYH2Q9UKX2 1941 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 VCANP13611 3396 aa2.81□□□□□ -1.96
PSEN1-211ENST00000554995 YLPM1P49750 1951 aaKnown RBP2.8□□□□□ -1.96
PSEN1-211ENST00000554995 ECM29Q5VYK3 1845 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 ARFGEF1Q9Y6D6 1849 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 LAMB1P07942 1786 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 DLEC1Q9Y238 1755 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 TIAM2Q8IVF5 1701 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 ZNF609O15014 1411 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 LOC102725191A0A1B0GVB3 256 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 KCNK1O00180 336 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 PSCAO43653 123 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 TAS2R45P59539 299 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 EMX1Q04741 257 aaPredicted RBP2.8□□□□□ -1.96
PSEN1-211ENST00000554995 FADDQ13158 208 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 SAPCD1Q5SSQ6 148 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 SBSNQ6UWP8 590 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 HIST2H3AQ71DI3 136 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 LRRC34Q8IZ02 419 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 LY6G5BQ8NDX9 201 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 OR2D3Q8NGH3 330 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 CMTM2Q8TAZ6 248 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 TMA16Q96EY4 203 aaKnown RBP2.8□□□□□ -1.96
PSEN1-211ENST00000554995 CPNE2Q96FN4 548 aaPredicted RBP2.8□□□□□ -1.96
PSEN1-211ENST00000554995 PKMYT1Q99640 499 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 OR51I2Q9H344 312 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 C11orf1Q9H5F2 150 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 GPR179Q6PRD1 2367 aa2.8□□□□□ -1.96
PSEN1-211ENST00000554995 C4AP0C0L4 1744 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 C4BP0C0L5 1744 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 PTPRJQ12913 1337 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 CCDC171Q6TFL3 1326 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 TGIF2-C20orf24A0A0A6YYL0 155 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 TNNC2P02585 160 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 IFNA16P05015 189 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 HLA-DQB2P05538 268 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 MRPS15P82914 257 aaKnown RBP2.79□□□□□ -1.96
PSEN1-211ENST00000554995 RASL11AQ6T310 242 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 ZNF550Q7Z398 422 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 CALHM3Q86XJ0 350 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 MSRB3Q8IXL7 192 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 DEFB123Q8N688 67 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 OR11H1Q8NG94 326 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 OR10D4PQ8NGN7 298 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 TVP23CQ96ET8 276 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 DIRAS2Q96HU8 199 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 NKX6-2Q9C056 277 aaPredicted RBP2.79□□□□□ -1.96
PSEN1-211ENST00000554995 SNX12Q9UMY4 172 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 LSM5Q9Y4Y9 91 aaKnown RBP2.79□□□□□ -1.96
PSEN1-211ENST00000554995 CDK5RAP2Q96SN8 1893 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 KIF13BQ9NQT8 1826 aa2.79□□□□□ -1.96
PSEN1-211ENST00000554995 RIC1Q4ADV7 1423 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 MYH8P13535 1937 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 UBR3Q6ZT12 1888 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 FOCADQ5VW36 1801 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 RPP14O95059 124 aaKnown RBP2.78□□□□□ -1.96
PSEN1-211ENST00000554995 CDS2O95674 445 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 UCHL3P15374 230 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 SLC25A16P16260 332 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 CCL1P22362 96 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 COL8A2P25067 703 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 CRYBB3P26998 211 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 MAP2K4P45985 399 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 PRDX4Q13162 271 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 OR2F1Q13607 317 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 HTR4Q13639 388 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 UAP1Q16222 522 aaPredicted RBP2.78□□□□□ -1.96
PSEN1-211ENST00000554995 BATFQ16520 125 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 FAM229BQ4G0N7 80 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 SPIN3Q5JUX0 258 aa2.78□□□□□ -1.96
PSEN1-211ENST00000554995 TMEM31Q5JXX7 168 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms