RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 TSHBP01222 138 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 SERPINE2P07093 398 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 CGB3P0DN86 165 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 CGB7P0DN87 165 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 CD80P33681 288 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 DVL1P1P54792 670 aaPredicted RBP3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 EDDM3AQ14507 147 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 BEX5Q5H9J7 111 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 ALKAL2Q6UX46 152 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 FAM71E2Q8N5Q1 922 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 DRAM1Q8N682 238 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 TCTEX1D1Q8N7M0 179 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 TPRX1Q8N7U7 411 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 OR52M1Q8NGK5 317 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 OR4D5Q8NGN0 318 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 OR51H1Q8NH63 302 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 UBALD1Q8TB05 177 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 ARL11Q969Q4 196 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 C14orf79Q96F83 325 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 AGMATQ9BSE5 352 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 PARP12Q9H0J9 701 aaKnown RBP3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 ZNF665Q9H7R5 613 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 OR2S2Q9NQN1 319 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 FAM212BQ9NTI7 297 aaPredicted RBP3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 JPT1Q9UK76 154 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 RNF115Q9Y4L5 304 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 AUP1Q9Y679 476 aa3.82□□□□□ -1.8
PPP4R3A-204ENST00000554574 CACNA1BQ00975 2339 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 MALRD1Q5VYJ5 2156 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TACC2O95359 2948 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TRAV38-1A0A0B4J264 116 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 A0A1B0GU03 582 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 MSGN1A6NI15 193 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 K7EPK0 472 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 LGALS8O00214 317 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 YPEL1O60688 119 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 CYB5R3P00387 301 aaPredicted RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TGFAP01135 160 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 PPP1CCP36873 323 aaKnown RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 EDDM3BP56851 147 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TFF3Q07654 80 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 EIF4EBP1Q13541 118 aaPredicted RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 GNMTQ14749 295 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TMEM30BQ3MIR4 351 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 FAM201AQ5SY85 155 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 GPR157Q5UAW9 335 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 PRSS57Q6UWY2 283 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 ZCCHC24Q8N2G6 241 aaKnown RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 SLC24A4Q8NFF2 622 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 LINC01560Q8TB33 94 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 LSM10Q969L4 123 aaKnown RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TMEM186Q96B77 213 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 GAFA1Q96PS6 74 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 YPEL2Q96QA6 119 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 ZNF471Q9BX82 626 aaPredicted RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 C1QTNF4Q9BXJ3 329 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 OR2D2Q9H210 308 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 PLEKHF2Q9H8W4 249 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 LINC00574Q9H8X3 128 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 DYNLRB1Q9NP97 96 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 MED9Q9NWA0 146 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 SPTAN1Q13813 2472 aaKnown RBP3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 MYO18BQ8IUG5 2567 aa3.81□□□□□ -1.8
PPP4R3A-204ENST00000554574 TRGV10A0A0A0MS01 117 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 KBTBD11-OT1A0A1B0GTJ5 212 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 NKX6-3A6NJ46 265 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 DEFB108AA8MXU0 73 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 ITGB1BP1O14713 200 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 KCNAB3O43448 404 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 PITX3O75364 302 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 FSTL3O95633 263 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 IGKV1-39P01597 117 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 GYPAP02724 150 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 GAPDHP04406 335 aaKnown RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 IGKV1D-39P04432 117 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 NMBP08949 121 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 RRASP10301 218 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 TPT1P13693 172 aaKnown RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 AREGP15514 252 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 LOXP28300 417 aaPredicted RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 RPL12P30050 165 aaKnown RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 P2RY1P47900 373 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 CATR1Q13166 79 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 GAMTQ14353 236 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 ZNF672Q499Z4 452 aaPredicted RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 MORN2Q502X0 79 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 THOC7Q6I9Y2 204 aaKnown RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 TGIF2LYQ8IUE0 185 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 BAP18Q8IXM2 172 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 FAM216BQ8N7L0 139 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 DMBX1Q8NFW5 382 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 RFESDQ8TAC1 157 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 HSD17B10Q99714 261 aaKnown RBP3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 DCTN5Q9BTE1 182 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 C11orf1Q9H5F2 150 aa3.8□□□□□ -1.8
PPP4R3A-204ENST00000554574 CYTL1Q9NRR1 136 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms