RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 TATDN3Q17R31 274 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 C9orf152Q5JTZ5 239 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 C10orf55Q5SWW7 151 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 ZNF429Q86V71 674 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 WIPF2Q8TF74 440 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-208ENST00000553719 ARPC1AQ92747 370 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 RRNAD1Q96FB5 475 aaKnown RBP14.21□□□□□ -0.13
PSEN1-208ENST00000553719 WNT10AQ9GZT5 417 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 COA4Q9NYJ1 87 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 FOXA2Q9Y261 457 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-208ENST00000553719 NSG2Q9Y328 171 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 TMED3Q9Y3Q3 217 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 TMEM89A2RUT3 159 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 ADAP1O75689 374 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 FXYD3Q14802 87 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 TNXAQ16473 311 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 GGNBP1Q5YKI7 109 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 C12orf45Q8N5I9 185 aaPredicted RBP14.2□□□□□ -0.14
PSEN1-208ENST00000553719 OR2T6Q8NHC8 308 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 SRSF12Q8WXF0 261 aaKnown RBP14.2□□□□□ -0.14
PSEN1-208ENST00000553719 GPN1Q9HCN4 374 aaPredicted RBP14.2□□□□□ -0.14
PSEN1-208ENST00000553719 PRNDQ9UKY0 176 aa14.2□□□□□ -0.14
PSEN1-208ENST00000553719 TEX22C9J3V5 150 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 AP4M1O00189 453 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 PITX3O75364 302 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 SLC25A6P12236 298 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 VDAC2P45880 294 aaPredicted RBP14.19□□□□□ -0.14
PSEN1-208ENST00000553719 RIPPLY3P57055 190 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 OR2B8PP59922 312 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 GNB1P62873 340 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 CFHR3Q02985 330 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 ASPHD1Q5U4P2 390 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 OR4F5Q8NH21 305 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 SGMS2Q8NHU3 365 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 CACNG5Q9UF02 275 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 ALG5Q9Y673 324 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 TENM1Q9UKZ4 2725 aa14.19□□□□□ -0.14
PSEN1-208ENST00000553719 TEX50A0A1B0GTY4 177 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 MPTX1A8MV57 137 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 SNAPC5O75971 98 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 HOXB5P09067 269 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 MDKP21741 143 aaPredicted RBP14.18□□□□□ -0.14
PSEN1-208ENST00000553719 PDLIM3Q53GG5 364 aaPredicted RBP14.18□□□□□ -0.14
PSEN1-208ENST00000553719 STPG2Q8N412 459 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 OR5B3Q8NH48 314 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 RNASE11Q8TAA1 199 aaKnown RBP14.18□□□□□ -0.14
PSEN1-208ENST00000553719 NOL4LQ96MY1 436 aaPredicted RBP14.18□□□□□ -0.14
PSEN1-208ENST00000553719 FAM103A1Q9BTL3 118 aaKnown RBP14.18□□□□□ -0.14
PSEN1-208ENST00000553719 QTRT1Q9BXR0 403 aaKnown RBP14.18□□□□□ -0.14
PSEN1-208ENST00000553719 PARP11Q9NR21 331 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 NDUFA4L2Q9NRX3 87 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 ZNF257Q9Y2Q1 563 aa14.18□□□□□ -0.14
PSEN1-208ENST00000553719 COL6A5A8TX70 2615 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 ANK2Q01484 3957 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 A0A1B0GU03 582 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 CLPSL1A2RUU4 121 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 SULT1A3P0DMM9 295 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 SULT1A4P0DMN0 295 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 RPL27AP46776 148 aaKnown RBP14.17□□□□□ -0.14
PSEN1-208ENST00000553719 PROK1P58294 105 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 C2orf68Q2NKX9 166 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 OR4A16Q8NH70 328 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 GRPEL2Q8TAA5 225 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 COMMD5Q9GZQ3 224 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 FKBP11Q9NYL4 201 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 OR51B2Q9Y5P1 312 aa14.17□□□□□ -0.14
PSEN1-208ENST00000553719 A0A1B0GUS0 222 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 ST8SIA3O43173 380 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 ACTL6BO94805 426 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 CNIH1O95406 144 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 PPIFP30405 207 aaKnown RBP14.16□□□□□ -0.14
PSEN1-208ENST00000553719 HSPE1P61604 102 aaKnown RBP14.16□□□□□ -0.14
PSEN1-208ENST00000553719 SMCO1Q147U7 214 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 AKIRIN2Q53H80 203 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 OR52E5Q8NH55 327 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 OR10C1Q96KK4 312 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 C19orf24Q9BVV8 132 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.16□□□□□ -0.14
PSEN1-208ENST00000553719 LINC00527Q9UJ94 153 aa14.16□□□□□ -0.14
PSEN1-208ENST00000553719 IGLC7A0M8Q6 106 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 MSGN1A6NI15 193 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 G3V318 75 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 OPN1MWP04001 364 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 OPN1MW2P0DN77 364 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 OPN1MW3P0DN78 364 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 PRCDQ00LT1 54 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 FOXL1Q12952 345 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 THOC7Q6I9Y2 204 aaKnown RBP14.15□□□□□ -0.14
PSEN1-208ENST00000553719 LFNGQ8NES3 379 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 OR1L8Q8NGR8 309 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 SPIN2AQ99865 258 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 SPIN2BQ9BPZ2 258 aa14.15□□□□□ -0.14
PSEN1-208ENST00000553719 SRSF8Q9BRL6 282 aaKnown RBP14.15□□□□□ -0.14
PSEN1-208ENST00000553719 TRAV41A0A0B4J266 112 aa14.14□□□□□ -0.15
PSEN1-208ENST00000553719 INS-IGF2F8WCM5 200 aa14.14□□□□□ -0.15
PSEN1-208ENST00000553719 CCSO14618 274 aa14.14□□□□□ -0.15
PSEN1-208ENST00000553719 SOX15O60248 233 aa14.14□□□□□ -0.15
PSEN1-208ENST00000553719 OR4D5Q8NGN0 318 aa14.14□□□□□ -0.15
PSEN1-208ENST00000553719 OR5M8Q8NGP6 311 aa14.14□□□□□ -0.15
PSEN1-208ENST00000553719 TMEM158Q8WZ71 300 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms