RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 P2RX4Q99571 388 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 RSG1Q9BU20 258 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 EIF5A2Q9GZV4 153 aaKnown RBP4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM231Q9H6L2 316 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 DYNLRB1Q9NP97 96 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM140Q9NV12 185 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 CTSZQ9UBR2 303 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 PRNDQ9UKY0 176 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TCF19Q9Y242 345 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 WDR83OSQ9Y284 106 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 FBXO7Q9Y3I1 522 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TLN1Q9Y490 2541 aaKnown RBP4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TRAV3A0A0B4J244 114 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 A0A1W2PPE3 182 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 MEX3AA1L020 520 aaKnown RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM8BA6NDV4 472 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 FAM74A7A6NL05 159 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 FAM90A27PA6NNH2 459 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 SRRM4A7MD48 611 aaKnown RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 C17orf112F2Z3M2 114 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 H7C2Y5 167 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RBMXL2O75526 392 aaKnown RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 KBTBD11O94819 623 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 IFNA17P01571 189 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 SRP19P09132 144 aaKnown RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 COL8A2P25067 703 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 CD1BP29016 333 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 MC5RP33032 325 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 MAS1LP35410 378 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 NPBWR1P48145 328 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 OR2B8PP59922 312 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RAB11AP62491 216 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 ICAM4Q14773 271 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RTL8BQ17RB0 113 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 FAM74A3Q4VXF1 159 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 OR8G2PQ6IF36 304 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 C11orf71Q6IPW1 123 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 UNQ6494/PRO21346Q6UXR6 183 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 Q8N7P7 452 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 LY6G5BQ8NDX9 201 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 OR13D1Q8NGV5 346 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 OR5B3Q8NH48 314 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 OR9G1Q8NH87 305 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 CA5BP1Q8WTZ4 195 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 C17orf50Q8WW18 174 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 NEU4Q8WWR8 484 aaPredicted RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RAB1CQ92928 201 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 LEAP2Q969E1 77 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RARRES2Q99969 163 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 WNT10AQ9GZT5 417 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RAB1BQ9H0U4 201 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 SLC35D1Q9NTN3 355 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 CBLN4Q9NTU7 201 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 MIOXQ9UGB7 285 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 RALYQ9UKM9 306 aaKnown RBP4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 ABCA4P78363 2273 aa4.89□□□□□ -1.63
VIPAS39-204ENST00000553576 CTXND1A0A1B0GTU2 59 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 TEX50A0A1B0GTY4 177 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 LOC102723971A0A1B0GUV8 181 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 A0A1W2PPH5 198 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 SEC14L6B5MCN3 397 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 H0YJW9 148 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 CYB5BO43169 146 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 IGHV3-7P01780 117 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 APOA2P02652 100 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 IGHV1-8P0DP01 117 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 CCL3L1P16619 93 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 FGF7P21781 194 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 OPRK1P41145 380 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 PPT1P50897 306 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 PRCDQ00LT1 54 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 CDSNQ15517 529 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 BSXQ3C1V8 233 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 C2orf83Q53S99 150 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 SOHLH1Q5JUK2 328 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 ACSM6Q6P461 480 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 RBMS3Q6XE24 437 aaKnown RBP4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 ETV3LQ6ZN32 361 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 SSX9Q7RTT3 188 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 DTX2Q86UW9 622 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 PDPNQ86YL7 162 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 VKORC1L1Q8N0U8 176 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 ABHD12Q8N2K0 398 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 BEND2Q8NDZ0 799 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 OR4C13Q8NGP0 309 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM170AQ8WVE7 144 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 LHX4Q969G2 390 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 RCC1LQ96I51 464 aaKnown RBP4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 RNF5Q99942 180 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 NABP2Q9BQ15 211 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 NPCDR1Q9BY65 106 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 ACTR3CQ9C0K3 210 aaPredicted RBP4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 VSIRQ9H7M9 311 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 NPVFQ9HCQ7 196 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 SMCO4Q9NRQ5 59 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 NDUFA4L2Q9NRX3 87 aa4.88□□□□□ -1.63
VIPAS39-204ENST00000553576 SLC39A9Q9NUM3 307 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms