RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GPHA2Q96T91 129 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 ZNF436Q9C0F3 470 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-209ENST00000553308 SPATA2Q9UM82 520 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 V9GY05 133 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 HECTD4Q9Y4D8 3996 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 IGHV3OR16-8A0A075B7F1 116 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 IGLC7A0M8Q6 106 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 OR4C46A6NHA9 309 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 PTGES3LE9PB15 166 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 DEFB4AO15263 64 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 TGOLN2O43493 480 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 ZNF207O43670 478 aaKnown RBP6.67□□□□□ -1.34
SYNE2-209ENST00000553308 HLA-DQB1P01920 261 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 HSMCR30P0CW71 290 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 HLA-GP17693 338 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 TALDO1P37837 337 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 OR10A3P58181 314 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 FABP5Q01469 135 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 PACRGLQ8N7B6 248 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 CD300LFQ8TDQ1 290 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 HSD17B10Q99714 261 aaKnown RBP6.67□□□□□ -1.34
SYNE2-209ENST00000553308 RARRES2Q99969 163 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 MFFQ9GZY8 342 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
SYNE2-209ENST00000553308 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
SYNE2-209ENST00000553308 TAS2R8Q9NYW2 309 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 OR2W1Q9Y3N9 320 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
SYNE2-209ENST00000553308 OR2T8A6NH00 312 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 IFNA4P05014 189 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 CTSDP07339 412 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-209ENST00000553308 DTYMKP23919 212 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 OR2B8PP59922 312 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 IRF3Q14653 427 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 TIMM50Q3ZCQ8 353 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 LAMTOR1Q6IAA8 161 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 MFSD4AQ8N468 514 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 OR11H2Q8NH07 326 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 C2CD4CQ8TF44 421 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 CENPOQ9BU64 300 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 CSTL1Q9H114 145 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 HRASLSQ9HDD0 168 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 C8orf4Q9NR00 106 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 APLNQ9ULZ1 77 aa6.66□□□□□ -1.34
SYNE2-209ENST00000553308 TRAV3A0A0B4J244 114 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 MPTX1A8MV57 137 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 IGLL5B9A064 214 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 TNFSF12O43508 249 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 SLC22A5O76082 557 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 HRASP01112 189 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 RAB6AP20340 208 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 PTBP1P26599 531 aaKnown RBP eCLIP6.65□□□□□ -1.34
SYNE2-209ENST00000553308 TRAM1Q15629 374 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 OR10W1Q8NGF6 305 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 CHRDL1Q9BU40 450 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 C20orf24Q9BUV8 137 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 BET1LQ9NYM9 111 aa6.65□□□□□ -1.34
SYNE2-209ENST00000553308 IGHV3-21A0A0B4J1V1 117 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 IFITM5A6NNB3 132 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-209ENST00000553308 NDUFA4O00483 81 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 XRCC3O43542 346 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 CTXN2P0C2S0 81 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 PSMA1P25786 263 aaKnown RBP6.64□□□□□ -1.35
SYNE2-209ENST00000553308 RANBP1P43487 201 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 TFPI2P48307 235 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 MFAP2P55001 183 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 TCTAP57738 103 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 ZNF66Q6ZN08 573 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 GVQW1Q8N7I0 195 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 OR4A5Q8NH83 315 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 NUDCD2Q8WVJ2 157 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 BSCL2Q96G97 398 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-209ENST00000553308 ZNF414Q96IQ9 312 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 RNF2Q99496 336 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 C6orf62Q9GZU0 229 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-209ENST00000553308 ATG5Q9H1Y0 275 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 THYN1Q9P016 225 aa6.64□□□□□ -1.35
SYNE2-209ENST00000553308 IGKV3-7A0A075B6H7 116 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 IGHV3-49A0A0A0MS15 119 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 METTL21EPA6NDL7 271 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 TMEM235A6NFC5 223 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 K7EMT4 169 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 UPK2O00526 184 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 CA1P00915 261 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-209ENST00000553308 MED14OSP0DP75 135 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 ADMP35318 185 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 MLLT11Q13015 90 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-209ENST00000553308 RCN1Q15293 331 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 SSX1Q16384 188 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 CDNFQ49AH0 187 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 CNIH2Q6PI25 160 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 SPSB3Q6PJ21 355 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 LINC00336Q6ZUF6 198 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 SPAG16Q8N0X2 631 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 GDPD1Q8N9F7 314 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 QTRT1Q9BXR0 403 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms