RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 RPL8P62917 257 aaKnown RBP12.43□□□□□ -0.42
CACNB3-222ENST00000552465 HES5Q5TA89 166 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 TMEM190Q8WZ59 177 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 UFD1Q92890 307 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 HSD17B10Q99714 261 aaKnown RBP12.43□□□□□ -0.42
CACNB3-222ENST00000552465 RARRES2Q99969 163 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 ERICH4A6NGS2 130 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 OR4C46A6NHA9 309 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 RPA2P15927 270 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 HLA-GP17693 338 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
CACNB3-222ENST00000552465 PTBP1P26599 531 aaKnown RBP eCLIP12.42□□□□□ -0.42
CACNB3-222ENST00000552465 RPS25P62851 125 aaKnown RBP12.42□□□□□ -0.42
CACNB3-222ENST00000552465 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
CACNB3-222ENST00000552465 SSX9Q7RTT3 188 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 CSTL1Q9H114 145 aa12.42□□□□□ -0.42
CACNB3-222ENST00000552465 IGKV1D-13A0A0B4J2D9 117 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 TGOLN2O43493 480 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 HRASP01112 189 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 IGKV1-13P0DP09 117 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 CALRP27797 417 aaKnown RBP12.41□□□□□ -0.42
CACNB3-222ENST00000552465 IRF3Q14653 427 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 TRAM1Q15629 374 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 MFSD4AQ8N468 514 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 C6orf62Q9GZU0 229 aaPredicted RBP12.41□□□□□ -0.42
CACNB3-222ENST00000552465 C11orf68Q9H3H3 251 aaKnown RBP12.41□□□□□ -0.42
CACNB3-222ENST00000552465 DAZ1Q9NQZ3 744 aaKnown RBP12.41□□□□□ -0.42
CACNB3-222ENST00000552465 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
CACNB3-222ENST00000552465 MPTX1A8MV57 137 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 DTYMKP23919 212 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 OR2B8PP59922 312 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 APRG1Q8IVJ8 170 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 OR11H2Q8NH07 326 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 OR4A5Q8NH83 315 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 THYN1Q9P016 225 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
CACNB3-222ENST00000552465 APLNQ9ULZ1 77 aa12.4□□□□□ -0.42
CACNB3-222ENST00000552465 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
CACNB3-222ENST00000552465 CTSDP07339 412 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-222ENST00000552465 RAB6AP20340 208 aa12.39□□□□□ -0.43
CACNB3-222ENST00000552465 PSMA1P25786 263 aaKnown RBP12.39□□□□□ -0.43
CACNB3-222ENST00000552465 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
CACNB3-222ENST00000552465 VN1R17PQ8TDU5 208 aa12.39□□□□□ -0.43
CACNB3-222ENST00000552465 BET1LQ9NYM9 111 aa12.39□□□□□ -0.43
CACNB3-222ENST00000552465 TAS2R8Q9NYW2 309 aa12.39□□□□□ -0.43
CACNB3-222ENST00000552465 RYR1P21817 5038 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 METTL21EPA6NDL7 271 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 HSMCR30P0CW71 290 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 FABP5Q01469 135 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 ZNF124Q15973 351 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 ZNF66Q6ZN08 573 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 GPHA2Q96T91 129 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 HRASLSQ9HDD0 168 aa12.38□□□□□ -0.43
CACNB3-222ENST00000552465 A0A1B0GVY2 172 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 OR2T8A6NH00 312 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 IGLL5B9A064 214 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 K7EMT4 169 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 NDUFA4O00483 81 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 ADMP35318 185 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-222ENST00000552465 TIMM50Q3ZCQ8 353 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 GVQW1Q8N7I0 195 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-222ENST00000552465 SRSF8Q9BRL6 282 aaKnown RBP12.37□□□□□ -0.43
CACNB3-222ENST00000552465 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
CACNB3-222ENST00000552465 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 IFITM5A6NNB3 132 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 DEFB4AO15263 64 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 ZNF207O43670 478 aaKnown RBP12.36□□□□□ -0.43
CACNB3-222ENST00000552465 MFAP2P55001 183 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 OR10A3P58181 314 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 ARL6IP1Q15041 203 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 CDNFQ49AH0 187 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 CHRDL1Q9BU40 450 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 DCSTAMPQ9H295 470 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 VPS13DQ5THJ4 4388 aa12.36□□□□□ -0.43
CACNB3-222ENST00000552465 UPK2O00526 184 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 PDCD5O14737 125 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 XRCC3O43542 346 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 MLLT11Q13015 90 aaPredicted RBP12.35□□□□□ -0.43
CACNB3-222ENST00000552465 SPSB3Q6PJ21 355 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 RNF2Q99496 336 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 COMMD5Q9GZQ3 224 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 ATG5Q9H1Y0 275 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 ACOT13Q9NPJ3 140 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 SCN3BQ9NY72 215 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 SMPXQ9UHP9 88 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 ETV7Q9Y603 341 aa12.35□□□□□ -0.43
CACNB3-222ENST00000552465 C11orf94C9JXX5 98 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms