RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FKBP2P26885 142 aaKnown RBP4.49□□□□□ -1.69
VPS29-210ENST00000552130 RTL8BQ17RB0 113 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 CGB2Q6NT52 195 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 LHFPL1Q86WI0 220 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 ZNF709Q8N972 641 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 FNDC9Q8TBE3 224 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 C2orf15Q8WU43 125 aaKnown RBP4.49□□□□□ -1.69
VPS29-210ENST00000552130 BORCS8Q96FH0 119 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 PEBP4Q96S96 227 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 GPX7Q96SL4 187 aaPredicted RBP4.49□□□□□ -1.69
VPS29-210ENST00000552130 SLC25A21Q9BQT8 299 aaPredicted RBP4.49□□□□□ -1.69
VPS29-210ENST00000552130 AICDAQ9GZX7 198 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 OR5AC2Q9NZP5 309 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 MRPS16Q9Y3D3 137 aaKnown RBP4.49□□□□□ -1.69
VPS29-210ENST00000552130 SCN5AQ14524 2016 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 TRIP11Q15643 1979 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 NALCNQ8IZF0 1738 aa4.49□□□□□ -1.69
VPS29-210ENST00000552130 ARAP3Q8WWN8 1544 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 IGHV3-72A0A0B4J1Y9 119 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 GABARAPH6UMI1 98 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 BMPR1BO00238 502 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 SLC25A14O95258 325 aaPredicted RBP4.48□□□□□ -1.69
VPS29-210ENST00000552130 IGKV1-39P01597 117 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 IGKV1D-39P04432 117 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 ZNF705DP0CH99 300 aaPredicted RBP4.48□□□□□ -1.69
VPS29-210ENST00000552130 CXCL5P42830 114 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 PPP3R1P63098 170 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 ATP5G2Q06055 141 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 LINC01551Q86U37 167 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 ZNF695Q8IW36 515 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 ZNF418Q8TF45 676 aaPredicted RBP4.48□□□□□ -1.69
VPS29-210ENST00000552130 SLAMF6Q96DU3 332 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 TAF9BQ9HBM6 251 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 NAT8Q9UHE5 227 aa4.48□□□□□ -1.69
VPS29-210ENST00000552130 ZNF106Q9H2Y7 1883 aaKnown RBP4.47□□□□□ -1.69
VPS29-210ENST00000552130 WDR97A6NE52 1622 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 MYO5BQ9ULV0 1848 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 IGKV1-6A0A0C4DH72 117 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 J3QQQ9 107 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 MAS1P04201 325 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 FGF7P21781 194 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 MT3P25713 68 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 TIMM10P62072 90 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 EIF3IQ13347 325 aaKnown RBP4.47□□□□□ -1.69
VPS29-210ENST00000552130 Q5XG85 94 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 PRR15Q8IV56 129 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 ORMDL3Q8N138 153 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 C15orf40Q8WUR7 153 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 TMEM106AQ96A25 262 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 TEX37Q96LM6 180 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 AP1S3Q96PC3 154 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 ZNF581Q9P0T4 197 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 NEO1Q92859 1461 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 PIKFYVEQ9Y2I7 2098 aa4.47□□□□□ -1.69
VPS29-210ENST00000552130 KIF13BQ9NQT8 1826 aa4.46□□□□□ -1.69
VPS29-210ENST00000552130 TET2Q6N021 2002 aaPredicted RBP4.46□□□□□ -1.69
VPS29-210ENST00000552130 TRAV38-1A0A0B4J264 116 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 TRAV41A0A0B4J266 112 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 LINC00862A6NCI5 91 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 IGLL5B9A064 214 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 UBE2L6O14933 153 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 SCO1O75880 301 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 LY6G6DO95868 133 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 ZNF823P16415 610 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 RBMXP38159 391 aaKnown RBP4.46□□□□□ -1.7
VPS29-210ENST00000552130 NMUP48645 174 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 COPZ1P61923 177 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 Q6ZTC4 211 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 SLC25A42Q86VD7 318 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 GPHB5Q86YW7 130 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 LYG1Q8N1E2 194 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 TCTEX1D1Q8N7M0 179 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 C20orf203Q8NBC4 194 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 OTORQ9NRC9 128 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 FAIMQ9NVQ4 179 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 ZFP30Q9Y2G7 519 aa4.46□□□□□ -1.7
VPS29-210ENST00000552130 TCF20Q9UGU0 1960 aaKnown RBP4.45□□□□□ -1.7
VPS29-210ENST00000552130 ADAMTSL1Q8N6G6 1762 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 IGLV1-50A0A075B6I6 118 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 IGHV3-66A0A0C4DH42 116 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 IZUMO1RA6ND01 250 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 TLCD2A6NGC4 264 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 IFITM10A6NMD0 228 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 PLA2G10O15496 165 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 PGLYRP1O75594 196 aaPredicted RBP4.45□□□□□ -1.7
VPS29-210ENST00000552130 LYZL6O75951 148 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 TRGC2P03986 189 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 HSPB1P04792 205 aaKnown RBP4.45□□□□□ -1.7
VPS29-210ENST00000552130 SRP19P09132 144 aaKnown RBP4.45□□□□□ -1.7
VPS29-210ENST00000552130 CD7P09564 240 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 LINC00869P0C866 280 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 P0DMU3 169 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 FAM231AP0DMU4 169 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 FAM231CP0DMU5 169 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 NFYBP25208 207 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 UBE2AP49459 152 aa4.45□□□□□ -1.7
VPS29-210ENST00000552130 PKIAP61925 76 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms