RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 NDUFB11Q9NX14 153 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 A0A1W2PPK0 400 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 DPPA5A6NC42 116 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 MFSD2BA6NFX1 497 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-222ENST00000551425 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-222ENST00000551425 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-222ENST00000551425 SRMP19623 302 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 RPS25P62851 125 aaKnown RBP8.64□□□□□ -1.03
PTCH1-222ENST00000551425 SSX1Q16384 188 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 OR10K2Q6IF99 312 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 PLET1Q6UQ28 207 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 CENPSQ8N2Z9 138 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 PHYHIPQ92561 330 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 TMEM203Q969S6 136 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 NICN1Q9BSH3 213 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 NDUFAF3Q9BU61 184 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 TMEM59Q9BXS4 323 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 AK3Q9UIJ7 227 aa8.64□□□□□ -1.03
PTCH1-222ENST00000551425 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 IGHV3-35A0A0C4DH35 117 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 A0A1B0GW64 132 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 TRDV1A0A1B0GX56 115 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 C15orf61A6NNL5 157 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 TRDCB7Z8K6 153 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 E7EUB6 86 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 CD74P04233 296 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 ZNF735P0CB33 412 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 AREGP15514 252 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 CD36P16671 472 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 GPR183P32249 361 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 DUTP33316 252 aaKnown RBP8.63□□□□□ -1.03
PTCH1-222ENST00000551425 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 Q6ZRM9 215 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 ZNF502Q8TBZ5 544 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 DERL3Q96Q80 235 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 C12orf4Q9NQ89 552 aa8.63□□□□□ -1.03
PTCH1-222ENST00000551425 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
PTCH1-222ENST00000551425 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 IGLV2-18A0A075B6J9 118 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 LINC00473A8K010 186 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 ARL6IP5O75915 188 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 MIFP14174 115 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 RPL27AP46776 148 aaKnown RBP8.62□□□□□ -1.03
PTCH1-222ENST00000551425 RPL5P46777 297 aaKnown RBP8.62□□□□□ -1.03
PTCH1-222ENST00000551425 ALDH3B2P48448 385 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 FABP5Q01469 135 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 UNC119Q13432 240 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 TIMM50Q3ZCQ8 353 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 HSD17B12Q53GQ0 312 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 OR4A4PQ8NGN8 299 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 OR51E2Q9H255 320 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 SSR3Q9UNL2 185 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 ETV7Q9Y603 341 aa8.62□□□□□ -1.03
PTCH1-222ENST00000551425 A0A0A6YYD4 124 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 K7EMT4 169 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 IFNA10P01566 189 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 UCHL1P09936 223 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 DEFA4P12838 97 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 RPA2P15927 270 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 MAS1LP35410 378 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 INSL4Q14641 139 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 SSX9Q7RTT3 188 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 GPR141Q7Z602 305 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 OR13F1Q8NGS4 319 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 YIPF6Q96EC8 236 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 CHRDL1Q9BU40 450 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 HSF4Q9ULV5 492 aa8.61□□□□□ -1.03
PTCH1-222ENST00000551425 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
PTCH1-222ENST00000551425 TMEM14DPA8MWL7 114 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 SOCS1O15524 211 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 TGOLN2O43493 480 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 KBTBD11O94819 623 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 DIRAS3O95661 229 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 IFNA21P01568 189 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 IFNA17P01571 189 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 CD3GP09693 182 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 GADD45AP24522 165 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 PTBP1P26599 531 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTCH1-222ENST00000551425 FGF9P31371 208 aaPredicted RBP8.6□□□□□ -1.03
PTCH1-222ENST00000551425 QRFPP83859 136 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 ARFRP1Q13795 201 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 C1orf100Q5SVJ3 147 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 OR10J5Q8NHC4 309 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 TMEM167AQ8TBQ9 72 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 CABLES2Q9BTV7 478 aa8.6□□□□□ -1.03
PTCH1-222ENST00000551425 TXNL4BQ9NX01 149 aaKnown RBP8.6□□□□□ -1.03
PTCH1-222ENST00000551425 TRBV6-7A0A0A0MS04 114 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 TRAV1-2A0A0B4J238 106 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 LOC100506127A0A0U1RQW1 187 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-222ENST00000551425 ZNF705EA8MWA4 302 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-222ENST00000551425 NDUFA4O00483 81 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 BET1O15155 118 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 FABP7O15540 132 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 MYL9P24844 172 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms