RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 C8orf88P0DMB2 117 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 DEFA4P12838 97 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 ANKRD55Q3KP44 614 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 TIMM50Q3ZCQ8 353 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 TM4SF20Q53R12 229 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 UBE2UQ5VVX9 321 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 UNQ9165/PRO28630Q6UXU0 137 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 TPRA1Q86W33 373 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 AIFM2Q9BRQ8 373 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 CCL28Q9NRJ3 127 aa16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 LOC102724200A0A096LPH7 203 aaPredicted RBP16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 RBFOX2O43251 390 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 TNFSF12O43508 249 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 MRPS14O60783 128 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 OR2B8PP59922 312 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 BTNL8Q6UX41 500 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 SPAG16Q8N0X2 631 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 LGALS14Q8TCE9 139 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 SECTM1Q8WVN6 248 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 MARC2Q969Z3 335 aa16.2■□□□□ 0.18
SMARCC2-210ENST00000550519 TRAV25A0A0B4J276 109 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 FCGR2CP31995 323 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 GABARAPL2P60520 117 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 SFXN4Q6P4A7 337 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 ZBTB34Q8NCN2 500 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 BEST4Q8NFU0 473 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 ZNF502Q8TBZ5 544 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 RHBDL2Q9NX52 303 aa16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 RRP15Q9Y3B9 282 aaKnown RBP16.19■□□□□ 0.18
SMARCC2-210ENST00000550519 IGLC7A0M8Q6 106 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 PTHLHP12272 177 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 ARPC4P59998 168 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 POU2AF1Q16633 256 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 ZNF773Q6PK81 442 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 GVQW1Q8N7I0 195 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 OR13F1Q8NGS4 319 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 HRASLSQ9HDD0 168 aa16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 MRPL27Q9P0M9 148 aaKnown RBP16.18■□□□□ 0.18
SMARCC2-210ENST00000550519 PPYP01298 95 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 GPR183P32249 361 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 ELLP55199 621 aaPredicted RBP16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 TAS2R31P59538 309 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 ZNF585BQ52M93 769 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 HOGA1Q86XE5 327 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 SPARTQ8N0X7 666 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 SRSF8Q9BRL6 282 aaKnown RBP16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 RAB26Q9ULW5 256 aa16.17■□□□□ 0.18
SMARCC2-210ENST00000550519 TRAV3A0A0B4J244 114 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 SULT1C2O00338 296 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 UPK2O00526 184 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 HPRT1P00492 218 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 PTBP1P26599 531 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 PSMB9P28065 219 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 SCAND1P57086 179 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 PLET1Q6UQ28 207 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 RBPMS2Q6ZRY4 209 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 WFDC3Q8IUB2 231 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 OR1L6Q8NGR2 347 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 LINC00476Q8WZB0 136 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 SLC25A38Q96DW6 304 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 ZNF436Q9C0F3 470 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 UFC1Q9Y3C8 167 aa16.16■□□□□ 0.18
SMARCC2-210ENST00000550519 TRAV18A0A075B6X5 111 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 FGF2P09038 288 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 NQO2P16083 231 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 CATR1Q13166 79 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 OR5H6Q8NGV6 325 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 COMMD5Q9GZQ3 224 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 SLC5A7Q9GZV3 580 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 C5orf66Q9H5L9 145 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 THYN1Q9P016 225 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 SSR3Q9UNL2 185 aa16.15■□□□□ 0.18
SMARCC2-210ENST00000550519 IGHV3-35A0A0C4DH35 117 aa16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 SDC2P34741 201 aa16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 OR2C3Q8N628 320 aa16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 FCGR1BQ92637 280 aa16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 SPAG8Q99932 426 aaPredicted RBP16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 QTRT1Q9BXR0 403 aaKnown RBP16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 TP53TG1Q9Y2A0 90 aa16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 ETV7Q9Y603 341 aa16.14■□□□□ 0.17
SMARCC2-210ENST00000550519 A0A0A6YYH2 397 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 A6NJ64 397 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 TGOLN2O43493 480 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 CLEC2LP0C7M8 214 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 ZNF818PQ6ZRF7 136 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 Q6ZWC4 215 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 SLC38A6Q8IZM9 456 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 OR10W1Q8NGF6 305 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 VN1R17PQ8TDU5 208 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 GIMAP1Q8WWP7 306 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 TMEM190Q8WZ59 177 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 PLEKHA2Q9HB19 425 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 TMEM140Q9NV12 185 aa16.13■□□□□ 0.17
SMARCC2-210ENST00000550519 FXYD4P59646 89 aa16.12■□□□□ 0.17
SMARCC2-210ENST00000550519 EWSR1Q01844 656 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCC2-210ENST00000550519 TNFRSF9Q07011 255 aa16.12■□□□□ 0.17
SMARCC2-210ENST00000550519 GDPD1Q8N9F7 314 aa16.12■□□□□ 0.17
SMARCC2-210ENST00000550519 CD300LFQ8TDQ1 290 aa16.12■□□□□ 0.17
SMARCC2-210ENST00000550519 AUNIPQ9H7T9 357 aa16.12■□□□□ 0.17
SMARCC2-210ENST00000550519 A0A0J9YWU9 116 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms