RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 HIST1H2BAQ96A08 127 aa3.22□□□□□ -1.89
HCFC2-204ENST00000550335 KLF6Q99612 283 aaPredicted RBP3.22□□□□□ -1.89
HCFC2-204ENST00000550335 MARCOQ9UEW3 520 aaPredicted RBP3.22□□□□□ -1.89
HCFC2-204ENST00000550335 RPL26L1Q9UNX3 145 aaKnown RBP3.22□□□□□ -1.89
HCFC2-204ENST00000550335 U3KQK5 164 aa3.22□□□□□ -1.89
HCFC2-204ENST00000550335 DMDP11532 3685 aa3.22□□□□□ -1.89
HCFC2-204ENST00000550335 DOCK4Q8N1I0 1966 aa3.21□□□□□ -1.89
HCFC2-204ENST00000550335 COL5A1P20908 1838 aaPredicted RBP3.21□□□□□ -1.89
HCFC2-204ENST00000550335 LRRN3E7EW58 273 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 COPEO14579 308 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 DAD1P61803 113 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 HPCAP84074 193 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 FLI1Q01543 452 aaPredicted RBP3.21□□□□□ -1.9
HCFC2-204ENST00000550335 BSPH1Q075Z2 132 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 SPA17Q15506 151 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 PRR9Q5T870 116 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 NCBP2-AS2Q69YL0 99 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 DNAAF3Q8N9W5 541 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 OR4C6Q8NH72 309 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 TESCQ96BS2 214 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 TLCD1Q96CP7 247 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 PYURFQ96I23 114 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 LYSMD1Q96S90 227 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 EIF5A2Q9GZV4 153 aaKnown RBP3.21□□□□□ -1.9
HCFC2-204ENST00000550335 MAP1LC3AQ9H492 121 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 ASF1BQ9NVP2 202 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 SLC23A2Q9UGH3 650 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 WASHC3Q9Y3C0 194 aa3.21□□□□□ -1.9
HCFC2-204ENST00000550335 CACNA1EQ15878 2313 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 MIF4GDA9UHW6 222 aaKnown RBP3.2□□□□□ -1.9
HCFC2-204ENST00000550335 IL6P05231 212 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 S100A6P06703 90 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 CTLA4P16410 223 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 CDK9P50750 372 aaKnown RBP3.2□□□□□ -1.9
HCFC2-204ENST00000550335 AP2S1P53680 142 aaPredicted RBP3.2□□□□□ -1.9
HCFC2-204ENST00000550335 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 NAA40Q86UY6 237 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 COMMD7Q86VX2 200 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 LRP11Q86VZ4 500 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 Q8N402 240 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 BPIFB6Q8NFQ5 453 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 OR10D3Q8NH80 312 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 PIGXQ8TBF5 258 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 TMBIM1Q969X1 311 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 PPP1R14BQ96C90 147 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 PACRGQ96M98 296 aaPredicted RBP3.2□□□□□ -1.9
HCFC2-204ENST00000550335 PPP1R2P1Q96PQ5 205 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 OR5V1Q9UGF6 321 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 CEP192Q8TEP8 1941 aa3.2□□□□□ -1.9
HCFC2-204ENST00000550335 DCHS1Q96JQ0 3298 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 PI4KAP42356 2102 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CACNA1AO00555 2505 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 ZNF292O60281 2723 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 TRBV24-1A0A075B6N3 115 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 hCG_1818297A0A087WSY0 165 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 IGKV1-12A0A0C4DH73 117 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 SPAARA0A1B0GVQ0 90 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 LOC285095A0A1B0GVY8 99 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 APOC4-APOC2K7ER74 178 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CXCR6O00574 342 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 MFSD11O43934 449 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 TNFP01375 233 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 IGKV1D-12P01611 117 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 IGHV3-53P01767 116 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 APOC2P02655 101 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 ATP5G1P05496 136 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CRYBA1P05813 215 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 OR4A8P0C604 315 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 NQO1P15559 274 aaKnown RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CD36P16671 472 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 RWDD2BP57060 319 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 SLC35A2P78381 396 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 Q6ZQT7 251 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 RASSF6Q6ZTQ3 369 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 SLC51BQ86UW2 128 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 GKN2Q86XP6 184 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CCDC112Q8NEF3 446 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 ACY3Q96HD9 319 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 ABHD14BQ96IU4 210 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 B9D2Q9BPU9 175 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 PARD6GQ9BYG4 376 aaPredicted RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 MRPS26Q9BYN8 205 aaKnown RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 MED28Q9H204 178 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 TRABDQ9H4I3 376 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 ZNF286AQ9HBT8 521 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 TAS2R1Q9NYW7 299 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 RPUSD1Q9UJJ7 312 aaKnown RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CARHSP1Q9Y2V2 147 aaKnown RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 NYNRINQ9P2P1 1898 aaKnown RBP3.19□□□□□ -1.9
HCFC2-204ENST00000550335 DNAH14Q0VDD8 3507 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 CEP250Q9BV73 2442 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 PCNX2A6NKB5 2137 aa3.19□□□□□ -1.9
HCFC2-204ENST00000550335 VPS13AQ96RL7 3174 aa3.18□□□□□ -1.9
HCFC2-204ENST00000550335 SDK1Q7Z5N4 2213 aa3.18□□□□□ -1.9
HCFC2-204ENST00000550335 ASCC3Q8N3C0 2202 aaKnown RBP3.18□□□□□ -1.9
HCFC2-204ENST00000550335 CFAP54Q96N23 3096 aa3.18□□□□□ -1.9
HCFC2-204ENST00000550335 KCNK1O00180 336 aa3.18□□□□□ -1.9
HCFC2-204ENST00000550335 MRASO14807 208 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms