RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 GGCTO75223 188 aaKnown RBP12.38□□□□□ -0.43
VPS29-207ENST00000549970 OR2C1O95371 312 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 EDN2P20800 178 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 OR2B8PP59922 312 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 CD300EQ496F6 205 aaPredicted RBP12.38□□□□□ -0.43
VPS29-207ENST00000549970 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 ADAMTSL5Q6ZMM2 481 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 OR5H2Q8NGV7 314 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 MUC7Q8TAX7 377 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 DYNLRB2Q8TF09 96 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 SLC25A46Q96AG3 418 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 ANAPC10Q9UM13 185 aa12.38□□□□□ -0.43
VPS29-207ENST00000549970 DYNC2H1Q8NCM8 4307 aaKnown RBP12.38□□□□□ -0.43
VPS29-207ENST00000549970 UPK2O00526 184 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 RLN1P04808 185 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 EIF4EP06730 217 aaKnown RBP12.37□□□□□ -0.43
VPS29-207ENST00000549970 HIST1H1BP16401 226 aaKnown RBP12.37□□□□□ -0.43
VPS29-207ENST00000549970 PRSS3P35030 304 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 ARL3P36405 182 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 MECP2P51608 486 aaKnown RBP12.37□□□□□ -0.43
VPS29-207ENST00000549970 TAS2R46P59540 309 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 NCS1P62166 190 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 DHRS11Q6UWP2 260 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 OR2K2Q8NGT1 345 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 CD300LFQ8TDQ1 290 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 BORCS5Q969J3 196 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 EEF1AKMT3Q96AZ1 226 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 COMMD5Q9GZQ3 224 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 TUBA4BQ9H853 241 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 PLEKHA2Q9HB19 425 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 COMMD3Q9UBI1 195 aa12.37□□□□□ -0.43
VPS29-207ENST00000549970 IGLV11-55A0A075B6I3 123 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 C2orf70A6NJV1 201 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 FOLR2P14207 255 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 NAT1P18440 290 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 VBP1P61758 197 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 FXYD6Q9H0Q3 95 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 COMMD9Q9P000 198 aa12.36□□□□□ -0.43
VPS29-207ENST00000549970 SACSQ9NZJ4 4579 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 PGLYRP1O75594 196 aaPredicted RBP12.35□□□□□ -0.43
VPS29-207ENST00000549970 HLA-DMAP28067 261 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 HRH1P35367 487 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 CD81P60033 236 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 ERVK-16P61578 105 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 KLK9Q2XQG4 91 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 GPHB5Q86YW7 130 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 CACNG8Q8WXS5 425 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
VPS29-207ENST00000549970 PLEKHA3Q9HB20 300 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 ZC4H2Q9NQZ6 224 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 KLK9Q9UKQ9 250 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 SELENOKQ9Y6D0 94 aa12.35□□□□□ -0.43
VPS29-207ENST00000549970 STARD9Q9P2P6 4700 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 SMIM31A0A1B0GVY4 71 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 ZNF320A2RRD8 509 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 MARCH11A6NNE9 402 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 LGALS9O00182 355 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 F2RP25116 425 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 GUCA2BQ16661 112 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 HAGHQ16775 308 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 DEFB114Q30KQ6 69 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 SNX29P2Q8IUI4 249 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 LYSMD2Q8IV50 215 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 CMTM1Q8IZ96 169 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 OR10W1Q8NGF6 305 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 OR6F1Q8NGZ6 308 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 CXorf58Q96LI9 332 aa12.34□□□□□ -0.43
VPS29-207ENST00000549970 TRBV7-1A0A0A6YYK4 115 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 ZNF785A8K8V0 405 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 GPR31O00270 319 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 APOA1P02647 267 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 CLEC3BP05452 202 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 CD7P09564 240 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 GPR183P32249 361 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 LPAR6P43657 344 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 TSPAN5P62079 268 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 FAM106AQ4KMX7 169 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 GPX8Q8TED1 209 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 FCAMRQ8WWV6 532 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
VPS29-207ENST00000549970 CITED4Q96RK1 184 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 NEURL2Q9BR09 285 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 SRSF8Q9BRL6 282 aaKnown RBP12.33□□□□□ -0.44
VPS29-207ENST00000549970 SLC2A8Q9NY64 477 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 NSG2Q9Y328 171 aa12.33□□□□□ -0.44
VPS29-207ENST00000549970 TEX50A0A1B0GTY4 177 aa12.32□□□□□ -0.44
VPS29-207ENST00000549970 TMEM213A2RRL7 107 aa12.32□□□□□ -0.44
VPS29-207ENST00000549970 HPGDSO60760 199 aa12.32□□□□□ -0.44
VPS29-207ENST00000549970 TPPPO94811 219 aa12.32□□□□□ -0.44
VPS29-207ENST00000549970 KRASP01116 189 aa12.32□□□□□ -0.44
VPS29-207ENST00000549970 TRAPPC2P0DI81 140 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms