RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 IGLV11-55A0A075B6I3 123 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 TPPPO94811 219 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 REG1AP05451 166 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 OR2B8PP59922 312 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 CLEC19AQ6UXS0 136 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 GPHB5Q86YW7 130 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 ZBTB34Q8NCN2 500 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 OR4A5Q8NH83 315 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 EEF1AKMT3Q96AZ1 226 aa13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 WDR89Q96FK6 387 aaPredicted RBP13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 TECRQ9NZ01 308 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-205ENST00000548650 MFSD2BA6NFX1 497 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 SULT1C2O00338 296 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 DHFRP00374 187 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 IFNA6P05013 189 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 FCER2P06734 321 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 FXYD4P59646 89 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 NEDD8Q15843 81 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 POU2AF1Q16633 256 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 DEFB125Q8N687 156 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 SLC5A7Q9GZV3 580 aa13.09□□□□□ -0.31
CHMP1A-205ENST00000548650 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 RBMY1BA6NDE4 496 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 RBMY1EA6NEQ0 496 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 RBMY1DP0C7P1 496 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 CBLN1P23435 193 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 TAS2R31P59538 309 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 CATR1Q13166 79 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 GUCA2BQ16661 112 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 SRD5A3Q9H8P0 318 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 HRASLSQ9HDD0 168 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 SELENOKQ9Y6D0 94 aa13.08□□□□□ -0.32
CHMP1A-205ENST00000548650 EPPK1P58107 5090 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 S1PR2O95136 353 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 HPRT1P00492 218 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 NQO2P16083 231 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 TMEM17Q86X19 198 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 OR51H1Q8NH63 302 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 AIFM2Q9BRQ8 373 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 DIABLOQ9NR28 239 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 TMEM140Q9NV12 185 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 MLXQ9UH92 298 aa13.07□□□□□ -0.32
CHMP1A-205ENST00000548650 OR11H12B2RN74 326 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 UPK2O00526 184 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 FGF2P09038 288 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 DEFA4P12838 97 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 CBX5P45973 191 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 UNQ9165/PRO28630Q6UXU0 137 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 GIMAP1Q8WWP7 306 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 CXorf58Q96LI9 332 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 COMMD9Q9P000 198 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 ANAPC10Q9UM13 185 aa13.06□□□□□ -0.32
CHMP1A-205ENST00000548650 TRBV7-1A0A0A6YYK4 115 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 TMEM127O75204 238 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 GPR183P32249 361 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 TGFBR1P36897 503 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 AADACL3Q5VUY0 350 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 ZNF57Q68EA5 555 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 SRSF8Q9BRL6 282 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 PLEKHA2Q9HB19 425 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
CHMP1A-205ENST00000548650 ZNF320A2RRD8 509 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 XRCC3O43542 346 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 GNRHRP30968 328 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 FAM106AQ4KMX7 169 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 BTNL8Q6UX41 500 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 UXS1Q8NBZ7 420 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 CD300LFQ8TDQ1 290 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 COMMD5Q9GZQ3 224 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 EHFQ9NZC4 300 aa13.04□□□□□ -0.32
CHMP1A-205ENST00000548650 RLN1P04808 185 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 CLEC3BP05452 202 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 HERV-K104P61576 105 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 TM4SF20Q53R12 229 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 UBE2NLQ5JXB2 153 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 DMBX1Q8NFW5 382 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 OR10W1Q8NGF6 305 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 FXYD6Q9H0Q3 95 aa13.03□□□□□ -0.32
CHMP1A-205ENST00000548650 ALMS1Q8TCU4 4167 aa13.02□□□□□ -0.32
CHMP1A-205ENST00000548650 MARCH11A6NNE9 402 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 SCAF4O95104 1147 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 C8orf88P0DMB2 117 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 RPA2P15927 270 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 WT1-ASQ06250 92 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms