RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 UCP3P55916 312 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 PRR20EP86478 221 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 PRR20CP86479 221 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 PRR20DP86480 221 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 PRR20BP86481 221 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 PRR20AP86496 221 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 CATR1Q13166 79 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 TNXAQ16473 311 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF429Q86V71 674 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 LAX1Q8IWV1 398 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 CADM3Q8N126 398 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 OR1N2Q8NGR9 330 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 MS4A10Q96PG2 267 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 AIFM2Q9BRQ8 373 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 NXF2Q9GZY0 626 aaKnown RBP10.64□□□□□ -0.71
PTCH1-217ENST00000548420 FXYD6Q9H0Q3 95 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 PLEKHA2Q9HB19 425 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 GPR31O00270 319 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 FGF2P09038 288 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 LGALS1P09382 135 aaKnown RBP10.63□□□□□ -0.71
PTCH1-217ENST00000548420 TAS2R31P59538 309 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 AADACL3Q5VUY0 350 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 LPCAT3Q6P1A2 487 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 ADAD2Q8NCV1 583 aaKnown RBP10.63□□□□□ -0.71
PTCH1-217ENST00000548420 OR4A5Q8NH83 315 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 SPIN2AQ99865 258 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 SPIN2BQ9BPZ2 258 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 SOSTQ9BQB4 213 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 RSRP1Q9BUV0 290 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 TINAGL1Q9GZM7 467 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-217ENST00000548420 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 BET1LQ9NYM9 111 aa10.63□□□□□ -0.71
PTCH1-217ENST00000548420 A0A1B0GW64 132 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TEX22C9J3V5 150 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 E7EUB6 86 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 GABARAPH6UMI1 98 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 CTDSPLO15194 276 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 RGS5O15539 181 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TRGV3P03979 118 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 CD74P04233 296 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 OR8U8P0C7N1 319 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 OR9G9P0C7N8 305 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 NQO2P16083 231 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TBPP20226 339 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 F2RP25116 425 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TPPP2P59282 170 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TSPAN5P62079 268 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 MRPS10P82664 201 aaKnown RBP10.62□□□□□ -0.71
PTCH1-217ENST00000548420 SSBP1Q04837 148 aaKnown RBP10.62□□□□□ -0.71
PTCH1-217ENST00000548420 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF585BQ52M93 769 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 OR4A47Q6IF82 309 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 LHFPL1Q86WI0 220 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 CMTM1Q8IZ96 169 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TTC9CQ8N5M4 171 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TMEM229BQ8NBD8 167 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 OR51H1Q8NH63 302 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 FCAMRQ8WWV6 532 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 OR5B12Q96R08 314 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 RBM38Q9H0Z9 239 aaKnown RBP10.62□□□□□ -0.71
PTCH1-217ENST00000548420 ALX4Q9H161 411 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-217ENST00000548420 FAM212BQ9NTI7 297 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-217ENST00000548420 COMMD9Q9P000 198 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 RABL2AQ9UBK7 228 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-217ENST00000548420 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 RABL2BQ9UNT1 228 aa10.62□□□□□ -0.71
PTCH1-217ENST00000548420 TRBV9A0A0B4J1U6 114 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 M0QYG6 137 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 RBMXL2O75526 392 aaKnown RBP10.61□□□□□ -0.71
PTCH1-217ENST00000548420 ACTL6BO94805 426 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 CD3DP04234 171 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF735P0CB33 412 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 C10orf55Q5SWW7 151 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 ARRDC1Q8N5I2 433 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 DGCR14Q96DF8 476 aaKnown RBP10.61□□□□□ -0.71
PTCH1-217ENST00000548420 USMG5Q96IX5 58 aa10.61□□□□□ -0.71
PTCH1-217ENST00000548420 CGB1A6NKQ9 187 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 LINC01619G3V211 115 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 UPK2O00526 184 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 NOL3O60936 208 aaKnown RBP10.6□□□□□ -0.71
PTCH1-217ENST00000548420 SAP30O75446 220 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 S1PR2O95136 353 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 RLN1P04808 185 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 RPL8P62917 257 aaKnown RBP10.6□□□□□ -0.71
PTCH1-217ENST00000548420 PMS2P11Q13670 270 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
PTCH1-217ENST00000548420 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF343Q6P1L6 599 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 SSX9Q7RTT3 188 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 SLC38A6Q8IZM9 456 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 SMIM4Q8WVI0 70 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 DCUN1D4Q92564 292 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 PHB2Q99623 299 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 SLC2A9Q9NRM0 540 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms