RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 CNIH1O95406 144 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 OPN1MWP04001 364 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 RNASE1P07998 156 aaKnown RBP12.93□□□□□ -0.34
HECTD4-206ENST00000548140 OPN1MW2P0DN77 364 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 OPN1MW3P0DN78 364 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 MAS1LP35410 378 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 FOXRED2Q8IWF2 684 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 ZBTB8BQ8NAP8 495 aaPredicted RBP12.93□□□□□ -0.34
HECTD4-206ENST00000548140 C2orf50Q96LR7 162 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 COMMD5Q9GZQ3 224 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 TMEM14BQ9NUH8 114 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 FOXA2Q9Y261 457 aaPredicted RBP12.93□□□□□ -0.34
HECTD4-206ENST00000548140 OR51B2Q9Y5P1 312 aa12.93□□□□□ -0.34
HECTD4-206ENST00000548140 TEX50A0A1B0GTY4 177 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 FAM181BA6NEQ2 426 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 HMX3A6NHT5 357 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 ST8SIA3O43173 380 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 H2BFSP57053 126 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 CX3CL1P78423 397 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 FXYD3Q14802 87 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 ZNF562Q6V9R5 426 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 HSPB9Q9BQS6 159 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 NPFFR1Q9GZQ6 430 aa12.92□□□□□ -0.34
HECTD4-206ENST00000548140 IGHV7-81A0A0B4J1V7 117 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 TRIM77I1YAP6 450 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 PITX3O75364 302 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 IFNA17P01571 189 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
HECTD4-206ENST00000548140 COMPP49747 757 aaPredicted RBP12.91□□□□□ -0.34
HECTD4-206ENST00000548140 HSPE1P61604 102 aaKnown RBP12.91□□□□□ -0.34
HECTD4-206ENST00000548140 C10orf55Q5SWW7 151 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 ZNF429Q86V71 674 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 HINT2Q9BX68 163 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 PRSS22Q9GZN4 317 aa12.91□□□□□ -0.34
HECTD4-206ENST00000548140 SCGB1D2O95969 90 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 CRYBA1P05813 215 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 FGF2P09038 288 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 BCAP31P51572 246 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 SSBP2P81877 361 aaPredicted RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 SPINK9Q5DT21 86 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 CXorf66Q5JRM2 361 aaPredicted RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 Q6ZS46 218 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 OR4D5Q8NGN0 318 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 OR5B3Q8NH48 314 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 GRPEL2Q8TAA5 225 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 SRSF12Q8WXF0 261 aaKnown RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 WDR89Q96FK6 387 aaPredicted RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 FYTTD1Q96QD9 318 aaKnown RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 ZNF436Q9C0F3 470 aaPredicted RBP12.9□□□□□ -0.34
HECTD4-206ENST00000548140 PARP11Q9NR21 331 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.34
HECTD4-206ENST00000548140 E7EUB6 86 aa12.89□□□□□ -0.35
HECTD4-206ENST00000548140 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
HECTD4-206ENST00000548140 NDPQ00604 133 aa12.89□□□□□ -0.35
HECTD4-206ENST00000548140 AARDQ4LEZ3 155 aa12.89□□□□□ -0.35
HECTD4-206ENST00000548140 ARSJQ5FYB0 599 aaPredicted RBP12.89□□□□□ -0.35
HECTD4-206ENST00000548140 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
HECTD4-206ENST00000548140 FAM103A1Q9BTL3 118 aaKnown RBP12.89□□□□□ -0.35
HECTD4-206ENST00000548140 NMES1Q9C002 83 aa12.89□□□□□ -0.35
HECTD4-206ENST00000548140 MSGN1A6NI15 193 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 LINC01548A6NM66 108 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 KCNAB3O43448 404 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 IGHG2P01859 326 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 SPCS3P61009 180 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 RPL15P61313 204 aaKnown RBP12.88□□□□□ -0.35
HECTD4-206ENST00000548140 SRSF2Q01130 221 aaKnown RBP12.88□□□□□ -0.35
HECTD4-206ENST00000548140 TNFRSF9Q07011 255 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 OR52E5Q8NH55 327 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 HSPB7Q9UBY9 170 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 CACFD1Q9UGQ2 172 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 CGB1A6NKQ9 187 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 FAM90A26D6RGX4 464 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 MBPP02686 304 aaPredicted RBP12.88□□□□□ -0.35
HECTD4-206ENST00000548140 APELAP0DMC3 54 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
HECTD4-206ENST00000548140 CD83Q01151 205 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 ID3Q02535 119 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 IL15RAQ13261 267 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 TAF15Q92804 592 aaKnown RBP eCLIP12.88□□□□□ -0.35
HECTD4-206ENST00000548140 MAGT1Q9H0U3 335 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 RBKSQ9H477 322 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
HECTD4-206ENST00000548140 CUBNO60494 3623 aa12.87□□□□□ -0.35
HECTD4-206ENST00000548140 TNCP24821 2201 aa12.87□□□□□ -0.35
HECTD4-206ENST00000548140 PLXNB1O43157 2135 aa12.87□□□□□ -0.35
HECTD4-206ENST00000548140 A0A1B0GW64 132 aa12.87□□□□□ -0.35
HECTD4-206ENST00000548140 WRBO00258 174 aa12.87□□□□□ -0.35
HECTD4-206ENST00000548140 GIPP09681 153 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms