RNA–Protein interactions for RNA: ENST00000545901.5

HMBS-223, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-223	ENST00000545901	GON7	Q9BXV9	100 aa		13.74	□□□□□ -0.21
HMBS-223	ENST00000545901	WNT10A	Q9GZT5	417 aa		13.74	□□□□□ -0.21
HMBS-223	ENST00000545901	GPN1	Q9HCN4	374 aa	Predicted RBP	13.74	□□□□□ -0.21
HMBS-223	ENST00000545901	TMEM14B	Q9NUH8	114 aa		13.74	□□□□□ -0.21
HMBS-223	ENST00000545901	COA4	Q9NYJ1	87 aa		13.74	□□□□□ -0.21
HMBS-223	ENST00000545901	TRAV3	A0A0B4J244	114 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	C15orf61	A6NNL5	157 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	SNRPGP15	A8MWD9	76 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	CNIH1	O95406	144 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	SPN	P16150	400 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	OXA1L	Q15070	435 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	TNXA	Q16473	311 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	NMS	Q5H8A3	153 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	THOC7	Q6I9Y2	204 aa	Known RBP	13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	LYZL2	Q7Z4W2	148 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	MINDY2	Q8NBR6	621 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	RNASE11	Q8TAA1	199 aa	Known RBP	13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	CHPT1	Q8WUD6	406 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	SRSF12	Q8WXF0	261 aa	Known RBP	13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	CACFD1	Q9UGQ2	172 aa		13.73	□□□□□ -0.21
HMBS-223	ENST00000545901	FOXA2	Q9Y261	457 aa	Predicted RBP	13.73	□□□□□ -0.21
HMBS-223	ENST00000545901		A0A0B4J293	547 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901		A0A0G2JRQ6	117 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	LINC01548	A6NM66	108 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	ATP6V0E1	O15342	81 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	EGR2	P11161	476 aa	Predicted RBP	13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	SLC25A6	P12236	298 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	PROK1	P58294	105 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	AKIRIN2	Q53H80	203 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	STPG2	Q8N412	459 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	OR5B3	Q8NH48	314 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	OR4A16	Q8NH70	328 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	WIPF2	Q8TF74	440 aa	Predicted RBP	13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	TAF15	Q92804	592 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	SPIN2A	Q99865	258 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	SPIN2B	Q9BPZ2	258 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	SRSF8	Q9BRL6	282 aa	Known RBP	13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	COMMD5	Q9GZQ3	224 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	PARP11	Q9NR21	331 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	PRR13	Q9NZ81	148 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	ZNF257	Q9Y2Q1	563 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	RNF114	Q9Y508	228 aa		13.72	□□□□□ -0.21
HMBS-223	ENST00000545901	DBX1	A6NMT0	343 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	MDK	P21741	143 aa	Predicted RBP	13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	RPL27A	P46776	148 aa	Known RBP	13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	GNB1	P62873	340 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	TMEM95	Q3KNT9	176 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	C19orf54	Q5BKX5	351 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	OR52B4	Q8NGK2	314 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	GPR146	Q96CH1	333 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	SEC22C	Q9BRL7	303 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.71	□□□□□ -0.21
HMBS-223	ENST00000545901	FBXO7	Q9Y3I1	522 aa		13.71	□□□□□ -0.21
HMBS-223	ENST00000545901		A0A1B0GU03	582 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	C7orf66	A4D0T2	115 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	OR2B8P	P59922	312 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	CFHR3	Q02985	330 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	AWAT1	Q58HT5	328 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901		Q6ZRM9	215 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	OR1L8	Q8NGR8	309 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	OR52E5	Q8NH55	327 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	QTRT1	Q9BXR0	403 aa	Known RBP	13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	NDUFA4L2	Q9NRX3	87 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	OR51B2	Q9Y5P1	312 aa		13.7	□□□□□ -0.22
HMBS-223	ENST00000545901	TRAV41	A0A0B4J266	112 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	TEX50	A0A1B0GTY4	177 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	TEX22	C9J3V5	150 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	SULT1A3	P0DMM9	295 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	SULT1A4	P0DMN0	295 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	PPIF	P30405	207 aa	Known RBP	13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	HSPE1	P61604	102 aa	Known RBP	13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	SLC35B1	P78383	322 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	SMCO1	Q147U7	214 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	C10orf55	Q5SWW7	151 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	COMMD1	Q8N668	190 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	GRPEL2	Q8TAA5	225 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	NOL4L	Q96MY1	436 aa	Predicted RBP	13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	CACNG5	Q9UF02	275 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	NSG2	Q9Y328	171 aa		13.69	□□□□□ -0.22
HMBS-223	ENST00000545901	MSGN1	A6NI15	193 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	RBMXL2	O75526	392 aa	Known RBP	13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	IFNA21	P01568	189 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	TRAPPC2	P0DI81	140 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	TRAPPC2B	P0DI82	140 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	TATDN3	Q17R31	274 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	IZUMO4	Q1ZYL8	232 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	GGNBP1	Q5YKI7	109 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	KLHDC1	Q8N7A1	406 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	ABHD5	Q8WTS1	349 aa		13.68	□□□□□ -0.22
HMBS-223	ENST00000545901	FAM103A1	Q9BTL3	118 aa	Known RBP	13.68	□□□□□ -0.22
HMBS-223	ENST00000545901		A0A1B0GW64	132 aa		13.67	□□□□□ -0.22
HMBS-223	ENST00000545901	PSMB11	A5LHX3	300 aa		13.67	□□□□□ -0.22
HMBS-223	ENST00000545901	CGB1	A6NKQ9	187 aa		13.67	□□□□□ -0.22
HMBS-223	ENST00000545901		E7EUB6	86 aa		13.67	□□□□□ -0.22
HMBS-223	ENST00000545901	INS-IGF2	F8WCM5	200 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms