RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TCF23Q7RTU1 214 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 SPAG16Q8N0X2 631 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 Q8N402 240 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MAPKAPK5-AS1Q8N8E1 139 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF383Q8NA42 475 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 OR4D10Q8NGI6 311 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 OR52M1Q8NGK5 317 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 OR6M1Q8NGM8 313 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 LINC01006Q8NI28 216 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MRGPRDQ8TDS7 321 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 ARL11Q969Q4 196 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 TMEM203Q969S6 136 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 ST6GALNAC6Q969X2 333 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 RPEQ96AT9 228 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 NKX3-1Q99801 234 aaPredicted RBP4.27□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF251Q9BRH9 671 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 BANF2Q9H503 90 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MLXQ9UH92 298 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MGAT4AQ9UM21 535 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 TCF19Q9Y242 345 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 ALG5Q9Y673 324 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 DSCAML1Q8TD84 2053 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 A6NDX4 124 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 MFSD2BA6NFX1 497 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 HMSDA8MTL9 139 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 SMIM1B2RUZ4 78 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 M0QZK8 103 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 SDCBPO00560 298 aaPredicted RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 SSX5O60225 188 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 FCGR3BO75015 233 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PDCD6O75340 191 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 IGLV1-47P01700 117 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 GAPDHP04406 335 aaKnown RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 GIPP09681 153 aaPredicted RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PAX6P26367 422 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 CDX1P47902 265 aaPredicted RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 NPBWR1P48145 328 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 MEOX2P50222 304 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 RAB7AP51149 207 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 MRPS10P82664 201 aaKnown RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 MADCAM1Q13477 382 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 EXOSC2Q13868 293 aaKnown RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 RAB11BQ15907 218 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 LTC4SQ16873 150 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 Q3ZCU0 254 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PDLIM3Q53GG5 364 aaPredicted RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 Q5BKY6 102 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 TPTE2P1Q5T6R2 138 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 HES5Q5TA89 166 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 LAMTOR1Q6IAA8 161 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PYHIN1Q6K0P9 492 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF497Q6ZNH5 498 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 OR2W3Q7Z3T1 314 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 LRRTM1Q86UE6 522 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 LYPD6Q86Y78 171 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 DYNAPQ8N1N2 210 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 OR4P4Q8NGL7 312 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 OR10X1Q8NGY0 326 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 OR56B4Q8NH76 319 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 RFESDQ8TAC1 157 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PLPPR1Q8TBJ4 325 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PIFOQ8TCI5 191 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 TOMM40LQ969M1 308 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 FAM46BQ96A09 425 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PHYHIPLQ96FC7 376 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 SOSTQ9BQB4 213 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 SEC22CQ9BRL7 303 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 TMEM59Q9BXS4 323 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 RIMS4Q9H426 269 aaPredicted RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF286AQ9HBT8 521 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 GPN1Q9HCN4 374 aaPredicted RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PLEKHJ1Q9NW61 149 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 SDHAF2Q9NX18 166 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 ABRACLQ9P1F3 81 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 PSG11Q9UQ72 335 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 AK6Q9Y3D8 172 aaKnown RBP4.26□□□□□ -1.73
CPSF7-220ENST00000541963 V9GY05 133 aa4.26□□□□□ -1.73
CPSF7-220ENST00000541963 TRAV1-2A0A0B4J238 106 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 TRDV1A0A1B0GX56 115 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 LY6LH3BQJ8 138 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 SLC17A2O00624 439 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 FABP7O15540 132 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 DFFBO76075 338 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 OR2F2O95006 317 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 TSHBP01222 138 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 APOHP02749 345 aaPredicted RBP4.25□□□□□ -1.73
CPSF7-220ENST00000541963 CD37P11049 281 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 BLVRBP30043 206 aaPredicted RBP4.25□□□□□ -1.73
CPSF7-220ENST00000541963 SSTR5P35346 364 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 GNG10P50151 68 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 RPS25P62851 125 aaKnown RBP4.25□□□□□ -1.73
CPSF7-220ENST00000541963 RPS27AP62979 156 aaKnown RBP4.25□□□□□ -1.73
CPSF7-220ENST00000541963 FABP5Q01469 135 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 INSL4Q14641 139 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 OPCMLQ14982 345 aa4.25□□□□□ -1.73
CPSF7-220ENST00000541963 HERPUD1Q15011 391 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms