RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 A0A1W2PRS3 328 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 SEC11AP67812 179 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 ZNF826PQ6ZT77 177 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 MRPL16Q9NX20 251 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 SYNGR3O43761 229 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 NPIPB3Q92617 1050 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 CEACAM1P13688 526 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 METTL26Q96S19 204 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 WFDC1Q9HC57 220 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 FAM19A2Q8N3H0 131 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 ZNF257Q9Y2Q1 563 aa12.69□□□□□ -0.38
SMARCA4-207ENST00000541122 MESP2Q0VG99 397 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 LINC00305Q7Z4B0 112 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 CACNG8Q8WXS5 425 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 FCGR2BP31994 310 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 PYY3Q5JQD4 70 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 ST6GALNAC6Q969X2 333 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 A0A1W2PS18 150 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 SRXN1Q9BYN0 137 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 RAXQ9Y2V3 346 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 PPP1R17O96001 155 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 NBEAP1P0C6P0 100 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 MBNL2Q5VZF2 373 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 OSR1Q8TAX0 266 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 ITLN1Q8WWA0 313 aa12.68□□□□□ -0.38
SMARCA4-207ENST00000541122 H3BUT2 72 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 FOXL1Q12952 345 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 C16orf92Q96LL3 132 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 PHLDA3Q9Y5J5 127 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 A0A1W2PQM1 296 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 C1QTNF9P0C862 333 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 AKIRIN1Q9H9L7 192 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 C12orf77C9JDV5 145 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 PAQR4Q8N4S7 273 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 CHCHD1Q96BP2 118 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 EAF1Q96JC9 268 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
SMARCA4-207ENST00000541122 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 BRWD1Q9NSI6 2320 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 TRBV20OR9-2A0A075B6H5 130 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 IGKV1D-43A0A0B4J1Z2 117 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 LDLRAD2Q5SZI1 272 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 KLF14Q8TD94 323 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 R4GN57 208 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 IGFBP2P18065 325 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 DLX6P56179 175 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 AICDAQ9GZX7 198 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 TMEM160Q9NX00 188 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 A0A1W2PRD5 423 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 A0A1W2PRF3 423 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 A0A1W2PRM7 423 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 ECSCRQ19T08 205 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 GFI1BQ5VTD9 330 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 ST6GALNAC3Q8NDV1 305 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 OR9G1Q8NH87 305 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 SIGMAR1Q99720 223 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 GPR82Q96P67 336 aa12.66□□□□□ -0.38
SMARCA4-207ENST00000541122 SRSF7Q16629 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 ACSF3Q4G176 576 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 KIR2DL4Q99706 377 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 PGPEP1LA6NFU8 196 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 SLC25A53Q5H9E4 307 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 AGMATQ9BSE5 352 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 C17orf98A8MV24 154 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 PRR32B1ATL7 298 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 ORAOV1Q8WV07 137 aa12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-207ENST00000541122 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 A0A1W2PRE2 83 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 PRR33A8MZF0 331 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 PRSS2P07478 247 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 VKORC1L1Q8N0U8 176 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 C10orf126Q8N4M7 172 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.39
SMARCA4-207ENST00000541122 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
SMARCA4-207ENST00000541122 LYL1P12980 280 aa12.64□□□□□ -0.39
SMARCA4-207ENST00000541122 TIMM23BQ5SRD1 257 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms