RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 MS4A7Q9GZW8 240 aaPredicted RBP11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 SLC25A31Q9H0C2 315 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 RBKSQ9H477 322 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 FBN1P35555 2871 aaKnown RBP11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 ABCA1O95477 2261 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 TRAV20A0A0B4J274 112 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 UPK2O00526 184 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 GATA3P23771 443 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 CD1BP29016 333 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 OR2B8PP59922 312 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 SPCS3P61009 180 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 RPL23AP62750 156 aaKnown RBP11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 LHFPL4Q7Z7J7 247 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 PDZD9Q8IXQ8 264 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 LINC01356Q8N9X3 169 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 RNF5Q99942 180 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
CYB561A3-216ENST00000540755 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 INAFM1C9JVW0 142 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 KBTBD11O94819 623 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 IGLV2-23P01705 113 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 CR1P17927 2039 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 CAV2P51636 162 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 BAXQ07812 192 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 VMA21Q3ZAQ7 101 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 TMEM252Q8N6L7 170 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 CFHR4Q92496 578 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 CIB3Q96Q77 187 aaPredicted RBP11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.57
CYB561A3-216ENST00000540755 BORCS7-ASMTA0A0B4J1R7 106 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 A0A1W2PRD5 423 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 A0A1W2PRF3 423 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 A0A1W2PRM7 423 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 TIMM23O14925 209 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 SPDEFO95238 335 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 FGF2P09038 288 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 IAPPP10997 89 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 DTD1Q8TEA8 209 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 RBMXL1Q96E39 390 aaKnown RBP11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 MALSU1Q96EH3 234 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 REG4Q9BYZ8 158 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 PSENENQ9NZ42 101 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 ZNF257Q9Y2Q1 563 aa11.45□□□□□ -0.58
CYB561A3-216ENST00000540755 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 CEBPZOSA8MTT3 80 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 NPFFO15130 113 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 VENTXO95231 258 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 IFNA17P01571 189 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 TEX45Q8NA69 505 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 UBAC2Q8NBM4 344 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 TSNAXQ99598 290 aaKnown RBP11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 CYTL1Q9NRR1 136 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 FBXL17Q9UF56 701 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 SSX2Q16385 188 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 ALKAL2Q6UX46 152 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 STX12Q86Y82 276 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 RNF141Q8WVD5 230 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 AJUBAQ96IF1 538 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 RITA1Q96K30 269 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 MDFIQ99750 246 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
CYB561A3-216ENST00000540755 IGHV1-69DA0A0B4J2H0 117 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 H3BP45 60 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 IGHV1-69P01742 117 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 CRYGBP07316 175 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 NMBP08949 121 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 SAA4P35542 130 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 SULT1A1P50225 295 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 RPL8P62917 257 aaKnown RBP11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 NHLH2Q02577 135 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 TMEM14EPQ6UXP3 125 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 OR5B3Q8NH48 314 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 C17orf50Q8WW18 174 aa11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
CYB561A3-216ENST00000540755 CLCC1Q96S66 551 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms