RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.3
CACNA2D4-211ENST00000540728 DMBX1Q8NFW5 382 aa13.15□□□□□ -0.3
CACNA2D4-211ENST00000540728 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
CACNA2D4-211ENST00000540728 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
CACNA2D4-211ENST00000540728 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
CACNA2D4-211ENST00000540728 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 GPR31O00270 319 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 CTDSP2O14595 271 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 OR2J3O76001 311 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 GP9P14770 177 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 RCVRNP35243 200 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 SYNJ2BPP57105 145 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 ERVK-16P61578 105 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 ZNF45Q02386 682 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 POU2AF1Q16633 256 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 LYSMD2Q8IV50 215 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
CACNA2D4-211ENST00000540728 UPK2O00526 184 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 RBMXL2O75526 392 aaKnown RBP13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 TRBV12-3P01733 135 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 RLN1P04808 185 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 DEFA4P12838 97 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 F2RP25116 425 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 PSMB6P28072 239 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 S100A5P33763 92 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 C15orf40Q8WUR7 153 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 FBXL7Q9UJT9 491 aa13.13□□□□□ -0.31
CACNA2D4-211ENST00000540728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 E7EUB6 86 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 S1PR2O95136 353 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 IGLV1-51P01701 117 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 CRYGCP07315 174 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 IL18Q14116 193 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 ASCL2Q99929 193 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 MIXL1Q9H2W2 232 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 PEMTQ9UBM1 199 aa13.12□□□□□ -0.31
CACNA2D4-211ENST00000540728 FGF2P09038 288 aa13.11□□□□□ -0.31
CACNA2D4-211ENST00000540728 AREGP15514 252 aa13.11□□□□□ -0.31
CACNA2D4-211ENST00000540728 LPAR6P43657 344 aa13.11□□□□□ -0.31
CACNA2D4-211ENST00000540728 WWC2-AS2Q96NR7 200 aa13.11□□□□□ -0.31
CACNA2D4-211ENST00000540728 U3KQK5 164 aa13.11□□□□□ -0.31
CACNA2D4-211ENST00000540728 TRAV3A0A0B4J244 114 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 A0A1B0GW64 132 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 MARCH11A6NNE9 402 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 H0Y980 276 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 BMPR1BO00238 502 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 CYB5BO43169 146 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 TPPPO94811 219 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 IFNA6P05013 189 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 MYOD1P15172 320 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 RPA2P15927 270 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 CTRB1P17538 263 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 OR2B8PP59922 312 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 PHLDA2Q53GA4 152 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 CTRB2Q6GPI1 263 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 HAPLN4Q86UW8 402 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 SRSF8Q9BRL6 282 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 NXF2Q9GZY0 626 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
CACNA2D4-211ENST00000540728 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 SNAPC5O75971 98 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 KRASP01116 189 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 REG1AP05451 166 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 FCAMRQ8WWV6 532 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 FANCD2OSQ96PS1 177 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 SIGLEC8Q9NYZ4 499 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 THYN1Q9P016 225 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 RABL2AQ9UBK7 228 aaPredicted RBP13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 RABL2BQ9UNT1 228 aa13.09□□□□□ -0.31
CACNA2D4-211ENST00000540728 GGCTO75223 188 aaKnown RBP13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 NDUFB8O95169 186 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 CSN3P07498 182 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 UCP3P55916 312 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 RNASE10Q5GAN6 216 aaKnown RBP13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 IL34Q6ZMJ4 242 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 HSD17B13Q7Z5P4 300 aaPredicted RBP13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 OR1L8Q8NGR8 309 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 CXorf58Q96LI9 332 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 BATF3Q9NR55 127 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 FAM212BQ9NTI7 297 aaPredicted RBP13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 DNAH9Q9NYC9 4486 aa13.08□□□□□ -0.32
CACNA2D4-211ENST00000540728 FABP12A6NFH5 140 aa13.07□□□□□ -0.32
CACNA2D4-211ENST00000540728 CGB1A6NKQ9 187 aa13.07□□□□□ -0.32
CACNA2D4-211ENST00000540728 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
CACNA2D4-211ENST00000540728 M0QYG6 137 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms