RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 C3orf79P0CE67 100 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 GNG4P50150 75 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 PLP1P60201 277 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 C9orf135Q5VTT2 229 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 SLC25A47Q6Q0C1 308 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 TMEM108Q6UXF1 575 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 GNB4Q9HAV0 340 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 KCNIP2Q9NS61 270 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 A0A0U1RQV5 110 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 GNG7O60262 68 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 ATP5G3P48201 142 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 ZNF324BQ6AW86 544 aaPredicted RBP7.32□□□□□ -1.24
DDB1-217ENST00000540166 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 IGHV3-9P01782 118 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 PRRX1P54821 245 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 RPL15P61313 204 aaKnown RBP7.32□□□□□ -1.24
DDB1-217ENST00000540166 LCN12Q6JVE5 192 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 AAED1Q7RTV5 226 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 ZNF611Q8N823 705 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 TNFRSF14Q92956 283 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 DECR2Q9NUI1 292 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 TRAPPC2LQ9UL33 140 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 OR5B21A6NL26 309 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 NDUFB8O95169 186 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 B4GALT1P15291 398 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 CLDN15P56746 228 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 SMIM21Q3B7S5 101 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 ACSF3Q4G176 576 aaPredicted RBP7.31□□□□□ -1.24
DDB1-217ENST00000540166 MPV17L2Q567V2 206 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 NMSQ5H8A3 153 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 FAM162BQ5T6X4 162 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 DOLPP1Q86YN1 238 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 WDFY1Q8IWB7 410 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 Q8NFD4 153 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 TIMM9Q9Y5J7 89 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 AKAP13Q12802 2813 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 C5orf63A6NC05 138 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 HAND1O96004 215 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 UBE2G1P62253 170 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 CATR1Q13166 79 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 NANOS1Q8WY41 292 aaKnown RBP7.31□□□□□ -1.24
DDB1-217ENST00000540166 UCN2Q96RP3 112 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 MRPL13Q9BYD1 178 aaKnown RBP7.31□□□□□ -1.24
DDB1-217ENST00000540166 TRAV38-1A0A0B4J264 116 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 NPIPB13A6NJU9 1138 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 NPIPB4C9JG80 1138 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 NEURL1O76050 574 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 VAMP5O95183 116 aa7.31□□□□□ -1.24
DDB1-217ENST00000540166 HEYLQ9NQ87 328 aaPredicted RBP7.31□□□□□ -1.24
DDB1-217ENST00000540166 ZNF407Q9C0G0 2248 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 TRAV9-1A0A075B6T8 112 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 TOMM40O96008 361 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 RBM11P57052 281 aaKnown RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 H2BFWTQ7Z2G1 175 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 ZDHHC23Q8IYP9 409 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 SAXO1Q8IYX7 474 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 PLPPR1Q8TBJ4 325 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 TXNDC17Q9BRA2 123 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 KCNIP1Q9NZI2 227 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 TNFSF11O14788 317 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 EFNA2O43921 213 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 MMP23AO75900 390 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 LINC00869P0C866 280 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 OTX1P32242 354 aaPredicted RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 YPEL3P61236 119 aaPredicted RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 ACSM6Q6P461 480 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 MRPL21Q7Z2W9 205 aaKnown RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 OR2T6Q8NHC8 308 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 UBALD1Q8TB05 177 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 DERL1Q9BUN8 251 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 OR2W1Q9Y3N9 320 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 GTF3C1Q12789 2109 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 DMXL1Q9Y485 3027 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 MYO9AB2RTY4 2548 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 LOC105371242A0A075B767 164 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 OR2T8A6NH00 312 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 ZNF816Q0VGE8 651 aaPredicted RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 LRRC10Q5BKY1 277 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 VWA1Q6PCB0 445 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 OR2M3Q8NG83 312 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 C12orf49Q9H741 205 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 UBTD1Q9HAC8 227 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 ENY2Q9NPA8 101 aa7.3□□□□□ -1.24
DDB1-217ENST00000540166 NCOA6Q14686 2063 aaPredicted RBP7.3□□□□□ -1.24
DDB1-217ENST00000540166 ZNF207O43670 478 aaKnown RBP7.29□□□□□ -1.24
DDB1-217ENST00000540166 ZNF32P17041 273 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 CCL1P22362 96 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 CTSSP25774 331 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 FKBP2P26885 142 aaKnown RBP7.29□□□□□ -1.24
DDB1-217ENST00000540166 TIMP3P35625 211 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 CAMPP49913 170 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 GNB1P62873 340 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 Q0VG73 95 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 SCGB2A2Q13296 93 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 SPINK9Q5DT21 86 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 IGFL2Q6UWQ7 119 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms