RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TEX36Q5VZQ5 186 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 ELP2Q6IA86 826 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 ZNF546Q86UE3 836 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 OR10P1Q8NGE3 313 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 Q8TCH9 128 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 TPPP3Q9BW30 176 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 PRDM13Q9H4Q3 707 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 HSF4Q9ULV5 492 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 STRAPQ9Y3F4 350 aaKnown RBP5.82□□□□□ -1.48
MSH6-209ENST00000538136 RHOBP62745 196 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 RAB31Q13636 194 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 LEMD1Q68G75 181 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 ZNF841Q6ZN19 808 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 LINC00596Q86U02 117 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 MMD2Q8IY49 270 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 DTD1Q8TEA8 209 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 PPP1R1CQ8WVI7 109 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 NPIPB3Q92617 1050 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 WDR89Q96FK6 387 aaPredicted RBP5.82□□□□□ -1.48
MSH6-209ENST00000538136 CMTM3Q96MX0 182 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 CITED2Q99967 270 aaPredicted RBP5.82□□□□□ -1.48
MSH6-209ENST00000538136 C5orf66Q9H5L9 145 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 MBD2Q9UBB5 411 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 V9GYH0 126 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 MXRA5Q9NR99 2828 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 PPP5D1E7EU14 171 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 KBTBD11O94819 623 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 RPLP1P05386 114 aaKnown RBP5.82□□□□□ -1.48
MSH6-209ENST00000538136 CST9LP1Q5W188 147 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 ADTRPQ96IZ2 230 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 CCDC32Q9BV29 185 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 C19orf24Q9BVV8 132 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 MFFQ9GZY8 342 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 KLK15Q9H2R5 256 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 TRAV41A0A0B4J266 112 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 NPIPB11E5RHQ5 1161 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 CD5LO43866 347 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 IFNA7P01567 189 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 TRAPPC2P0DI81 140 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 TRAPPC2BP0DI82 140 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 DUTP33316 252 aaKnown RBP5.81□□□□□ -1.48
MSH6-209ENST00000538136 RIPPLY3P57055 190 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 UBE2G2P60604 165 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 C15orf32Q32M92 178 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 LCN15Q6UWW0 184 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 DNM1P46Q6ZS02 220 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 OR52M1Q8NGK5 317 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 ZNF431Q8TF32 576 aaPredicted RBP5.81□□□□□ -1.48
MSH6-209ENST00000538136 TMEM158Q8WZ71 300 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 GPR146Q96CH1 333 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 NABP2Q9BQ15 211 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 TM2D1Q9BX74 207 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 MOB4Q9Y3A3 225 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 NUBP2Q9Y5Y2 271 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 CPAMD8Q8IZJ3 1885 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 ANKRD20A5PA0PJZ0 165 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 C9orf170A2RU37 121 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 M0R1W7 72 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 PLA2G10O15496 165 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 HPRT1P00492 218 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 SLC38A11Q08AI6 406 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 OR11H1Q8NG94 326 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 NMES1Q9C002 83 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 RBM38Q9H0Z9 239 aaKnown RBP5.81□□□□□ -1.48
MSH6-209ENST00000538136 IFI27L2Q9H2X8 130 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 TCF19Q9Y242 345 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 TRBV6-7A0A0A0MS04 114 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 A0A0A6YYJ9 748 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 KANTRA0A1W2PQU2 76 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 RRHO14718 337 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 NPY1RP25929 384 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 IFITM3Q01628 133 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 ATP5G2Q06055 141 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 EXOSC2Q13868 293 aaKnown RBP5.81□□□□□ -1.48
MSH6-209ENST00000538136 KLF9Q13886 244 aaPredicted RBP5.81□□□□□ -1.48
MSH6-209ENST00000538136 C5orf64Q2M2E5 130 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 ZNF181Q2M3W8 571 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 TUSC1Q2TAM9 212 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 ZDHHC22Q8N966 263 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 FAM216AQ8WUB2 273 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 VPREB3Q9UKI3 123 aa5.81□□□□□ -1.48
MSH6-209ENST00000538136 NAP1L6A6NFF2 107 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 SRRM4A7MD48 611 aaKnown RBP5.8□□□□□ -1.48
MSH6-209ENST00000538136 YPEL1O60688 119 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 SCGB2A1O75556 95 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 HTN3P15516 51 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 GATA3P23771 443 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 ZNF585BQ52M93 769 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 OR8H3Q8N146 312 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 YPEL2Q96QA6 119 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 RAB18Q9NP72 206 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 PDZD2O15018 2839 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 NAPSAO96009 420 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 FCGR2BP31994 310 aaPredicted RBP5.8□□□□□ -1.48
MSH6-209ENST00000538136 PSG5Q15238 335 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 Q6ZRG5 221 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 H1FOOQ8IZA3 346 aaPredicted RBP5.8□□□□□ -1.48
MSH6-209ENST00000538136 HSPB9Q9BQS6 159 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms