RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 FOXA2Q9Y261 457 aaPredicted RBP19.16■□□□□ 0.66
HMGA2-208ENST00000537429 LINC01548A6NM66 108 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 SSNA1O43805 119 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 SULT1A3P0DMM9 295 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 SULT1A4P0DMN0 295 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 MYOD1P15172 320 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 COMPP49747 757 aaPredicted RBP19.15■□□□□ 0.66
HMGA2-208ENST00000537429 NDPQ00604 133 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 SMCO1Q147U7 214 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 FXYD3Q14802 87 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 ZNF429Q86V71 674 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.15■□□□□ 0.66
HMGA2-208ENST00000537429 FKBP11Q9NYL4 201 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 CCSO14618 274 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 CNIH1O95406 144 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 AARDQ4LEZ3 155 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 C10orf55Q5SWW7 151 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 SLC35E3Q7Z769 313 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 COMMD5Q9GZQ3 224 aa19.15■□□□□ 0.66
HMGA2-208ENST00000537429 E7EUB6 86 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 KCNAB3O43448 404 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 PITX3O75364 302 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 RBMXL2O75526 392 aaKnown RBP19.14■□□□□ 0.65
HMGA2-208ENST00000537429 OR10C1Q96KK4 312 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 SPIN2AQ99865 258 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 SPIN2BQ9BPZ2 258 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 QTRT1Q9BXR0 403 aaKnown RBP19.14■□□□□ 0.65
HMGA2-208ENST00000537429 ZNF257Q9Y2Q1 563 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 OR51B2Q9Y5P1 312 aa19.14■□□□□ 0.65
HMGA2-208ENST00000537429 TEX50A0A1B0GTY4 177 aa19.13■□□□□ 0.65
HMGA2-208ENST00000537429 EGR2P11161 476 aaPredicted RBP19.13■□□□□ 0.65
HMGA2-208ENST00000537429 OR5B3Q8NH48 314 aa19.13■□□□□ 0.65
HMGA2-208ENST00000537429 ABHD5Q8WTS1 349 aa19.13■□□□□ 0.65
HMGA2-208ENST00000537429 SRSF12Q8WXF0 261 aaKnown RBP19.13■□□□□ 0.65
HMGA2-208ENST00000537429 ARPC1AQ92747 370 aa19.13■□□□□ 0.65
HMGA2-208ENST00000537429 FBXO7Q9Y3I1 522 aa19.13■□□□□ 0.65
HMGA2-208ENST00000537429 CGB1A6NKQ9 187 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 ATP6V0E1O15342 81 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 ST8SIA3O43173 380 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 OPN1MWP04001 364 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 OPN1MW2P0DN77 364 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 OPN1MW3P0DN78 364 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 RPL27AP46776 148 aaKnown RBP19.12■□□□□ 0.65
HMGA2-208ENST00000537429 THOC7Q6I9Y2 204 aaKnown RBP19.12■□□□□ 0.65
HMGA2-208ENST00000537429 OR1L8Q8NGR8 309 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 OR2T6Q8NHC8 308 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 TET2Q6N021 2002 aaPredicted RBP19.12■□□□□ 0.65
HMGA2-208ENST00000537429 C2CD3Q4AC94 2353 aa19.12■□□□□ 0.65
HMGA2-208ENST00000537429 A0A1B0GW64 132 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 GOSR2O14653 212 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 NDUFA7O95182 113 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 IGF1P05019 195 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 HSPE1P61604 102 aaKnown RBP19.11■□□□□ 0.65
HMGA2-208ENST00000537429 IAH1Q2TAA2 248 aaPredicted RBP19.11■□□□□ 0.65
HMGA2-208ENST00000537429 OR5M8Q8NGP6 311 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 FAM103A1Q9BTL3 118 aaKnown RBP19.11■□□□□ 0.65
HMGA2-208ENST00000537429 MED28Q9H204 178 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 C16orf95Q9H693 158 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 PARP11Q9NR21 331 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 NDUFA4L2Q9NRX3 87 aa19.11■□□□□ 0.65
HMGA2-208ENST00000537429 C13orf42A0A1B0GVH6 325 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 GSG1LQ6UXU4 331 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 OR52E5Q8NH55 327 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 OR1S1Q8NH92 325 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 SGMS2Q8NHU3 365 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 GRPEL2Q8TAA5 225 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 C5orf51A6NDU8 294 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 MSGN1A6NI15 193 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 FAM25EA8MYX2 175 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 AP4M1O00189 453 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 VDAC2P45880 294 aaPredicted RBP19.1■□□□□ 0.65
HMGA2-208ENST00000537429 CRIP2P52943 208 aaPredicted RBP19.1■□□□□ 0.65
HMGA2-208ENST00000537429 RRAS2P62070 204 aaPredicted RBP19.1■□□□□ 0.65
HMGA2-208ENST00000537429 TMEM95Q3KNT9 176 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.1■□□□□ 0.65
HMGA2-208ENST00000537429 SERTAD4Q9NUC0 356 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 MGAT4CQ9UBM8 478 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 ZNF580Q9UK33 172 aa19.1■□□□□ 0.65
HMGA2-208ENST00000537429 TEX22C9J3V5 150 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 IFNA17P01571 189 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 FCN2Q15485 313 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 PDLIM3Q53GG5 364 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-208ENST00000537429 ZBTB8BQ8NAP8 495 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-208ENST00000537429 OR4D5Q8NGN0 318 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 OR4F5Q8NH21 305 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 C2orf50Q96LR7 162 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 FYTTD1Q96QD9 318 aaKnown RBP19.09■□□□□ 0.65
HMGA2-208ENST00000537429 PDCD10Q9BUL8 212 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 CACFD1Q9UGQ2 172 aa19.09■□□□□ 0.65
HMGA2-208ENST00000537429 SIX6O95475 246 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 TRAPPC2P0DI81 140 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 TRAPPC2BP0DI82 140 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 HKR1P10072 659 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 H2BFSP57053 126 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 SPCS3P61009 180 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 PRCDQ00LT1 54 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 CXorf66Q5JRM2 361 aaPredicted RBP19.08■□□□□ 0.64
HMGA2-208ENST00000537429 OR11H7Q8NGC8 314 aa19.08■□□□□ 0.64
HMGA2-208ENST00000537429 NOL4LQ96MY1 436 aaPredicted RBP19.08■□□□□ 0.64
HMGA2-208ENST00000537429 HSPB7Q9UBY9 170 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms