RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 TEPPQ6URK8 271 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 FAM180AQ6UWF9 173 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 S100A7AQ86SG5 101 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 ODF3L1Q8IXM7 274 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 DRAM1Q8N682 238 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 IL1F10Q8WWZ1 152 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 RDH5Q92781 318 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 APH1AQ96BI3 265 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 KCNS1Q96KK3 526 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 TRIB1Q96RU8 372 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 HSPB9Q9BQS6 159 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 MRPL32Q9BYC8 188 aaKnown RBP4.89□□□□□ -1.63
CHD4-206ENST00000536999 PRRG4Q9BZD6 226 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 OPN3Q9H1Y3 402 aaPredicted RBP4.89□□□□□ -1.63
CHD4-206ENST00000536999 SLC25A22Q9H936 323 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 LPAR2Q9HBW0 351 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 CBLN4Q9NTU7 201 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 TECRQ9NZ01 308 aaKnown RBP4.89□□□□□ -1.63
CHD4-206ENST00000536999 MTCH1Q9NZJ7 389 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 PPP1R3CQ9UQK1 317 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 LAMTOR2Q9Y2Q5 125 aa4.89□□□□□ -1.63
CHD4-206ENST00000536999 ARHGEF17Q96PE2 2063 aaPredicted RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 SPTBP11277 2137 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 LRP4O75096 1905 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 TRAV30A0A087WSZ9 112 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 TRAV24A0A0B4J272 114 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 IGHV3-20A0A0C4DH32 117 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 IGKV1-6A0A0C4DH72 117 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 C5orf49A4QMS7 147 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 FAM231BA6NCW3 169 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 C17orf51A8MQB3 221 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 SHISA8B8ZZ34 492 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 C22orf46C9J442 243 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 TNFSF12O43508 249 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 NGFP01138 241 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 AMY1AP04745 511 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 P0C879 139 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 HIST1H1EP10412 219 aaKnown RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 EDN3P14138 238 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 G0S2P27469 103 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 CHRNB4P30926 498 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 AMTP48728 403 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD4-206ENST00000536999 SRSF6Q13247 344 aaKnown RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 SSPNQ14714 243 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 MRPL54Q6P161 138 aaKnown RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 Q6ZN92 141 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 FAM231DQ6ZW35 169 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 RTN4RL2Q86UN3 420 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 WDFY1Q8IWB7 410 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 DMRTC2Q8IXT2 367 aaPredicted RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 MMD2Q8IY49 270 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 SHISA5Q8N114 240 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 OR1L6Q8NGR2 347 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 OR10D3Q8NH80 312 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 CACNG8Q8WXS5 425 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 FAM173AQ9BQD7 235 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 MS4A6AQ9H2W1 248 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 PLEKHA3Q9HB20 300 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 ST20Q9HBF5 79 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 AURKAIP1Q9NWT8 199 aaPredicted RBP4.88□□□□□ -1.63
CHD4-206ENST00000536999 NAT8BQ9UHF3 227 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 JPT1Q9UK76 154 aa4.88□□□□□ -1.63
CHD4-206ENST00000536999 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.638e-8■■□□□ 13.7
CHD4-206ENST00000536999 CSMD2Q7Z408 3487 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 SDK2Q58EX2 2172 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 TRAV9-2A0A087WT02 112 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 IGHV1-69-2A0A0G2JMI3 117 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 ODAMA1E959 279 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 IZUMO1RA6ND01 250 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 NKX6-3A6NJ46 265 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 PMS2P5A8MQ11 134 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 SNURFLB1AK76 121 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 AQP7O14520 342 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 EREGO14944 169 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 CXCL13O43927 109 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 LILRA1O75019 489 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 ZNF324O75467 553 aaPredicted RBP4.87□□□□□ -1.63
CHD4-206ENST00000536999 HSBP1O75506 76 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 TRAPPC6AO75865 159 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 WISP2O76076 250 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 TOMM40O96008 361 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 APCSP02743 223 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 SNRPCP09234 159 aaKnown RBP4.87□□□□□ -1.63
CHD4-206ENST00000536999 IRF2P14316 349 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 HOXB4P17483 251 aaPredicted RBP4.87□□□□□ -1.63
CHD4-206ENST00000536999 TNFSF4P23510 183 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 GCHFRP30047 84 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 ADMP35318 185 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 LHX2P50458 406 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 CASP6P55212 293 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 ERVK11-1P61568 191 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 GNB1P62873 340 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 MRPS11P82912 194 aaKnown RBP4.87□□□□□ -1.63
CHD4-206ENST00000536999 ARL16Q0P5N6 197 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 SMIM21Q3B7S5 101 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
CHD4-206ENST00000536999 SPATA45Q537H7 98 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms