RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CDO1Q16878 200 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 HLA-DRB5Q30154 266 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ITPRIPL2Q3MIP1 535 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 GGTA1PQ4G0N0 100 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MPV17L2Q567V2 206 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR10J3Q5JRS4 329 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TIMM23BQ5SRD1 257 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TMEM215Q68D42 235 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 SLC25A34Q6PIV7 304 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 Q6Q795 121 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 GLIPR1L1Q6UWM5 242 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 LCN15Q6UWW0 184 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 PLXDC2Q6UX71 529 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 RBPMS2Q6ZRY4 209 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 Q6ZS92 163 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TMEM150AQ86TG1 271 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 BAGE3Q86Y29 109 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 BAGE2Q86Y30 109 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 FAM219AQ8IW50 185 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF595Q8IYB9 648 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TEX29Q8N6K0 151 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF676Q8N7Q3 588 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF611Q8N823 705 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR8B12Q8NGG6 310 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR52E2Q8NGJ4 325 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR5D13Q8NGL4 314 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR9G4Q8NGQ1 327 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR10AG1Q8NH19 301 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR4A5Q8NH83 315 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ATP6V0E2Q8NHE4 81 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF563Q8TA94 476 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR51E1Q8TCB6 317 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MRPL30Q8TCC3 161 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 C18orf32Q8TCD1 76 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 APOBEC4Q8WW27 367 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 EMG1Q92979 244 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 GLYATL1Q969I3 302 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MRPL24Q96A35 216 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 BORCS7Q96B45 105 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 GNPNAT1Q96EK6 184 aaPredicted RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 WDR34Q96EX3 536 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 LINC00615Q96LM1 132 aaPredicted RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 DGAT2Q96PD7 388 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TSSK2Q96PF2 358 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 DERL3Q96Q80 235 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 GPER1Q99527 375 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 SPIN2AQ99865 258 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 SPIN2BQ9BPZ2 258 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TM2D1Q9BX74 207 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 HCAR1Q9BXC0 346 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 COMMD5Q9GZQ3 224 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MS4A6AQ9H2W1 248 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 PPDPFQ9H3Y8 114 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MAP1LC3AQ9H492 121 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 FNDC4Q9H6D8 234 aaPredicted RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 NRN1Q9NPD7 142 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 KLRF1Q9NZS2 232 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR1A1Q9P1Q5 309 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 B4GALT7Q9UBV7 327 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 RABAC1Q9UI14 185 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ANXA10Q9UJ72 324 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 VSIG4Q9Y279 399 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF443Q9Y2A4 671 aaPredicted RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF257Q9Y2Q1 563 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 NSG2Q9Y328 171 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MED31Q9Y3C7 131 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 IER3IP1Q9Y5U9 82 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 LIPGQ9Y5X9 500 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 COL5A3P25940 1745 aaPredicted RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ATRXP46100 2492 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ANAPC1Q9H1A4 1944 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 UBR3Q6ZT12 1888 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 KIF26AQ9ULI4 1882 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 TRAV36DV7A0A075B6V5 113 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 TRAV18A0A075B6X5 111 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MUC21A0A0G2JKD1 596 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MUC21A0A140T8X8 626 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 KBTBD11-OT1A0A1B0GTJ5 212 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PP11 408 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FEZF1A0PJY2 475 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF732B4DXR9 585 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ANKRD66B4E2M5 251 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 TMEM262E9PQX1 116 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 F5H768 121 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 J3QLW9 94 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FFAR1O14842 300 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 TNFSF14O43557 240 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SYNGR1O43759 233 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF217O75362 1048 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FCN3O75636 299 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SERF1AO75920 110 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 STK17BO94768 372 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 KBTBD11O94819 623 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 EML2O95834 649 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MOSP00540 346 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 IGKV3-15P01624 115 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 APOA2P02652 100 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms