RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 MUC7Q8TAX7 377 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 EEF1AKMT3Q96AZ1 226 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 MOB3AQ96BX8 217 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 CXorf58Q96LI9 332 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 CITED4Q96RK1 184 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 COMMD5Q9GZQ3 224 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
CAPN1-228ENST00000534373 EHFQ9NZC4 300 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 COMMD9Q9P000 198 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 THYN1Q9P016 225 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 SMIM31A0A1B0GVY4 71 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 MEIS3P1A6NDR6 274 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 CYB5BO43169 146 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 NDUFB8O95169 186 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 FCER2P06734 321 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 AREGP15514 252 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 F2RP25116 425 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 TGFBR1P36897 503 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 RFX2P48378 723 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 DEFB114Q30KQ6 69 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 FAM106AQ4KMX7 169 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 AADACL3Q5VUY0 350 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 HSD17B13Q7Z5P4 300 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-228ENST00000534373 TMEM17Q86X19 198 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 CMTM1Q8IZ96 169 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 OR6F1Q8NGZ6 308 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 ZNF2Q9BSG1 426 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-228ENST00000534373 TUBA4BQ9H853 241 aa10.15□□□□□ -0.78
CAPN1-228ENST00000534373 RYR3Q15413 4870 aa10.15□□□□□ -0.79
CAPN1-228ENST00000534373 IGLV11-55A0A075B6I3 123 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 IZUMO1RA6ND01 250 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 C2orf70A6NJV1 201 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 CGB1A6NKQ9 187 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 PPP5D1E7EU14 171 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 PGLYRP1O75594 196 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-228ENST00000534373 OR2C1O95371 312 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 APOA1P02647 267 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 FOLR2P14207 255 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 ARL3P36405 182 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 LSM3P62310 102 aaKnown RBP10.14□□□□□ -0.79
CAPN1-228ENST00000534373 CD300EQ496F6 205 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-228ENST00000534373 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 DMBX1Q8NFW5 382 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 OR5H2Q8NGV7 314 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 DYNLRB2Q8TF09 96 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 CCDC140Q96MF4 163 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 TMEM140Q9NV12 185 aa10.14□□□□□ -0.79
CAPN1-228ENST00000534373 IGLC7A0M8Q6 106 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 ZNF785A8K8V0 405 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 S1PR2O95136 353 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 PMP2P02689 132 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 CBLN1P23435 193 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.79
CAPN1-228ENST00000534373 ERVK-16P61578 105 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 HAGHQ16775 308 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 CASC10Q5T4H9 136 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 CLEC19AQ6UXS0 136 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 LYSMD2Q8IV50 215 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 GPX8Q8TED1 209 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 DGCR14Q96DF8 476 aaKnown RBP10.13□□□□□ -0.79
CAPN1-228ENST00000534373 QTRT1Q9BXR0 403 aaKnown RBP10.13□□□□□ -0.79
CAPN1-228ENST00000534373 SCPEP1Q9HB40 452 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 ZC4H2Q9NQZ6 224 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 FAM212BQ9NTI7 297 aaPredicted RBP10.13□□□□□ -0.79
CAPN1-228ENST00000534373 SLC2A8Q9NY64 477 aa10.13□□□□□ -0.79
CAPN1-228ENST00000534373 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 MARCH11A6NNE9 402 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 A8MWP6 167 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 GPR31O00270 319 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 TPPPO94811 219 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 HLA-AP01891 365 aaKnown RBP10.12□□□□□ -0.79
CAPN1-228ENST00000534373 CLEC3BP05452 202 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 TRAPPC2P0DI81 140 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 TRAPPC2BP0DI82 140 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 SMIM18P0DKX4 95 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 LYL1P12980 280 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 MYOD1P15172 320 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 S100GP29377 79 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 C19orf35Q6ZS72 473 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 VN1R17PQ8TDU5 208 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 ATP6V0BQ99437 205 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 NEURL2Q9BR09 285 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 FUNDC2Q9BWH2 189 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 FKBP11Q9NYL4 201 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 COMMD3Q9UBI1 195 aa10.12□□□□□ -0.79
CAPN1-228ENST00000534373 TEX50A0A1B0GTY4 177 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 SNAPC5O75971 98 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 IGHV3-23P01764 117 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 RLN1P04808 185 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 IFNA6P05013 189 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 REG1AP05451 166 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 EIF4EP06730 217 aaKnown RBP10.11□□□□□ -0.79
CAPN1-228ENST00000534373 SERPINE2P07093 398 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 HRH1P35367 487 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 LPAR6P43657 344 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 CD81P60033 236 aa10.11□□□□□ -0.79
CAPN1-228ENST00000534373 TSPAN5P62079 268 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms