RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910		Q5PR19	223 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	LYPD2	Q6UXB3	125 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	HEPN1	Q6WQI6	88 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF66	Q6ZN08	573 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF841	Q6ZN19	808 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF546	Q86UE3	836 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF695	Q8IW36	515 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	KCNRG	Q8N5I3	272 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	C8orf31	Q8N9H6	132 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	OR4D5	Q8NGN0	318 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	OR51H1	Q8NH63	302 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	RFESD	Q8TAC1	157 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	THAP6	Q8TBB0	222 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	WIPF2	Q8TF74	440 aa	Predicted RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	TMEM170A	Q8WVE7	144 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	LSM10	Q969L4	123 aa	Known RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	HSD17B10	Q99714	261 aa	Known RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	RNF126	Q9BV68	326 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	MFF	Q9GZY8	342 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	PLEKHF2	Q9H8W4	249 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	ZFP57	Q9NU63	452 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	SDHAF2	Q9NX18	166 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	PSG11	Q9UQ72	335 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	RBM7	Q9Y580	266 aa	Known RBP	4.64	□□□□□ -1.67
CHKA-208	ENST00000533910	LRRK2	Q5S007	2527 aa		4.64	□□□□□ -1.67
CHKA-208	ENST00000533910		A0A0D9SG52	128 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	MEX3A	A1L020	520 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	LYNX1	G3V0Z9	82 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910		K7EPK0	472 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	OVOL3	O00110	214 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	SLC31A2	O15432	143 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	BCL2L11	O43521	198 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	PROP1	O75360	226 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	PITX3	O75364	302 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	DEDD	O75618	318 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	MMP23A	O75900	390 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	IGKV1-5	P01602	117 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RBP4	P02753	201 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	SERPINE2	P07093	398 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	LYNX1	P0DP58	116 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	DAO	P14920	347 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RAB4A	P20338	218 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	OMG	P23515	440 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	SSTR2	P30874	369 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	DUT	P33316	252 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	GPR12	P47775	334 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	CEBPG	P53567	150 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	F2RL1	P55085	397 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	BRWD1-AS2	P59051	145 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RAB11A	P62491	216 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RPL30	P62888	115 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	TLE4	Q04727	773 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	OPCML	Q14982	345 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	LTC4S	Q16873	150 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	CT45A1	Q5HYN5	189 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	UTF1	Q5T230	341 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	SLC25A48	Q6ZT89	311 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ACOT7L	Q6ZUV0	252 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	TMUB2	Q71RG4	321 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF767P	Q75MW2	155 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ODF3L1	Q8IXM7	274 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	FAM71E2	Q8N5Q1	922 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	LINC00311	Q8N616	119 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	OR1S1	Q8NH92	325 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	CT45A3	Q8NHU0	189 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	C8orf46	Q8TAG6	207 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	DDB2	Q92466	427 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	DCUN1D4	Q92564	292 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RRNAD1	Q96FB5	475 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	BSCL2	Q96G97	398 aa	Predicted RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	TIMD4	Q96H15	378 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF714	Q96N38	554 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	AQP10	Q96PS8	301 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF251	Q9BRH9	671 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ARL6	Q9H0F7	186 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	C11orf1	Q9H5F2	150 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	TMEM231	Q9H6L2	316 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	UBTD1	Q9HAC8	227 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	COA4	Q9NYJ1	87 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	OR5AC2	Q9NZP5	309 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RNF150	Q9ULK6	438 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	LAMP3	Q9UQV4	416 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	FOXA2	Q9Y261	457 aa	Predicted RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	RCL1	Q9Y2P8	373 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	ARID1A	O14497	2285 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	YLPM1	P49750	1951 aa	Known RBP	4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	FAM208B	Q5VWN6	2430 aa		4.63	□□□□□ -1.67
CHKA-208	ENST00000533910	CHD6	Q8TD26	2715 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SAA2-SAA4	A0A096LPE2	208 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910		A0A0G2JRQ6	117 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910		A0A1B0GU03	582 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	MSGN1	A6NI15	193 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	C17orf98	A8MV24	154 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	RHOD	O00212	210 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	RAB29	O14966	203 aa		4.62	□□□□□ -1.67

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