RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PTPRBP23467 1997 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 FAM90A9PA6NNJ1 464 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 LINC00473A8K010 186 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 NKX2-8O15522 239 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 PSPNO60542 156 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 GCHFRP30047 84 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 CLDN18P56856 261 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 SUMO1P63165 101 aaKnown RBP12.27□□□□□ -0.45
CAPN1-224ENST00000533129 SPATA45Q537H7 98 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 WDR73Q6P4I2 378 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
CAPN1-224ENST00000533129 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
CAPN1-224ENST00000533129 PRSS46E5RG02 174 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 MEOX1P50221 254 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 COX19Q49B96 90 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 MIC13Q5XKP0 118 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 FAM53AQ6NSI3 398 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-224ENST00000533129 TMEM251Q8N6I4 163 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 V9GYV3 84 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 EP300Q09472 2414 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-224ENST00000533129 FAM166BA8MTA8 275 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 TCF21O43680 179 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 MT-CO2P00403 227 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 OR9G9P0C7N8 305 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 ARG2P78540 354 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
CAPN1-224ENST00000533129 ZNF253O75346 499 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 OR10J4P0C629 311 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 MAGEA5P43359 124 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 HTD2P86397 168 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 MMDQ15546 238 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 FAM103A1Q9BTL3 118 aaKnown RBP12.25□□□□□ -0.45
CAPN1-224ENST00000533129 HES4Q9HCC6 221 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 J3QW42 95 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 REG1AP05451 166 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 CELA3AP09093 270 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 IGLC2P0DOY2 106 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 IGLC3P0DOY3 106 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 AREGP15514 252 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 SRSF6Q13247 344 aaKnown RBP12.25□□□□□ -0.45
CAPN1-224ENST00000533129 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 ASCL5Q7RTU5 278 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 TMEM178AQ8NBL3 297 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 ST6GALNAC3Q8NDV1 305 aa12.25□□□□□ -0.45
CAPN1-224ENST00000533129 AQP7O14520 342 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 FRMD6-AS1P0C7T7 363 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 AMTP48728 403 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 CEBPDP49716 269 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-224ENST00000533129 RHOBP62745 196 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 OR8I2Q8N0Y5 310 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 OR52E5Q8NH55 327 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 STARD4Q96DR4 205 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 CX3CL1P78423 397 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 ORAOV1Q8WV07 137 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 NANOS1Q8WY41 292 aaKnown RBP12.24□□□□□ -0.45
CAPN1-224ENST00000533129 NAT8BQ9UHF3 227 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 LSM4Q9Y4Z0 139 aaKnown RBP12.24□□□□□ -0.45
CAPN1-224ENST00000533129 ARL2-SNX15V9GYD0 113 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 HYPMO75409 117 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 NDUFB8O95169 186 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 VDAC2P45880 294 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-224ENST00000533129 GABRA6Q16445 453 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 STPG4Q8N801 248 aa12.24□□□□□ -0.45
CAPN1-224ENST00000533129 HEYLQ9NQ87 328 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-224ENST00000533129 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-224ENST00000533129 OR5G3P0C626 314 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 WT1P19544 449 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-224ENST00000533129 AESQ08117 197 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 EFNB3Q15768 340 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 COQ2Q96H96 371 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 LAMTOR2Q9Y2Q5 125 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 A0A1W2PS18 150 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 C20orf202A1L168 122 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
CAPN1-224ENST00000533129 LINC00205P59089 165 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 PRAMEF5Q5TYX0 476 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 PRAMEF6Q5VXH4 476 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 TMEM136Q6ZRR5 245 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 MDP1Q86V88 176 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 OR4A16Q8NH70 328 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 TXN2Q99757 166 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 NPVFQ9HCQ7 196 aa12.23□□□□□ -0.45
CAPN1-224ENST00000533129 GFRA3O60609 400 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 CCL11P51671 97 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 TBC1D28Q2M2D7 210 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 Q6ZN92 141 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 KLHDC1Q8N7A1 406 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 ZNF324O75467 553 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-224ENST00000533129 GABRA2P47869 451 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 GNG4P50150 75 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 PRRX1P54821 245 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 FOXF2Q12947 444 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 IGFL2Q6UWQ7 119 aa12.22□□□□□ -0.45
CAPN1-224ENST00000533129 FDCSPQ8NFU4 85 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms