RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 STX19Q8N4C7 294 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 FAM71E2Q8N5Q1 922 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 LINC00311Q8N616 119 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 TMEM104Q8NE00 496 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 OR11H1Q8NG94 326 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 OR52N1Q8NH53 320 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 UBALD1Q8TB05 177 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 ARL11Q969Q4 196 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 S100A13Q99584 98 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 METTL9Q9H1A3 318 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 PAK1IP1Q9NWT1 392 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-213ENST00000530784 TECRQ9NZ01 308 aaKnown RBP4.93□□□□□ -1.62
CSDE1-213ENST00000530784 IL36GQ9NZH8 169 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 GNG12Q9UBI6 72 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 TENM3Q9P273 2699 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 DSCAML1Q8TD84 2053 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 FAM168BA1KXE4 195 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF736B4DX44 427 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-213ENST00000530784 CHEK1O14757 476 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 GEMIN2O14893 280 aaKnown RBP4.92□□□□□ -1.62
CSDE1-213ENST00000530784 SLC31A2O15432 143 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF780AO75290 641 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-213ENST00000530784 CIB2O75838 187 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 IGF1P05019 195 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 OR9G9P0C7N8 305 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 SERPINA2P20848 420 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 PSMB8P28062 276 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF93P35789 620 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-213ENST00000530784 RAB40BQ12829 278 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 MMDQ15546 238 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 MPV17LQ2QL34 196 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 SLC22A6Q4U2R8 563 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 C6orf183Q5T699 404 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 FAM27D1Q5T7N8 215 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 ASCL4Q6XD76 172 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 Q6ZRG5 221 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 SLC25A48Q6ZT89 311 aaKnown RBP4.92□□□□□ -1.62
CSDE1-213ENST00000530784 MUC7Q8TAX7 377 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 MYOZ3Q8TDC0 251 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 RGP1Q92546 391 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-213ENST00000530784 TMEM106AQ96A25 262 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 UBE2E2Q96LR5 201 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 KCTD7Q96MP8 289 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 Q96MT0 163 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 SPACA1Q9HBV2 294 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 AMBNQ9NP70 447 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 ISYNA1Q9NPH2 558 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 TMEM138Q9NPI0 162 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 PLSCR3Q9NRY6 295 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 TRAPPC2LQ9UL33 140 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 ING4Q9UNL4 249 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 GMPPBQ9Y5P6 360 aa4.92□□□□□ -1.62
CSDE1-213ENST00000530784 FOXI3A8MTJ6 420 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-213ENST00000530784 C12orf77C9JDV5 145 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 MCRIP1C9JLW8 97 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 MT-ND4P03905 459 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 GTF2F2P13984 249 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 GTF2A1P52655 376 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF137PP52743 207 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF616Q08AN1 781 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 RIPK1Q13546 671 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 GPR176Q14439 515 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 TIMM50Q3ZCQ8 353 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 CCDC58Q4VC31 144 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 CASC10Q5T4H9 136 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 RPL22L1Q6P5R6 122 aaKnown RBP4.91□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF429Q86V71 674 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 STHQ8IWL8 128 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF439Q8NDP4 499 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 OR52I1Q8NGK6 324 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 OR1N2Q8NGR9 330 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 PYDC1Q8WXC3 89 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 OR5B12Q96R08 314 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 PALMDQ9NP74 551 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 PARP11Q9NR21 331 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 CKLFQ9UBR5 152 aa4.91□□□□□ -1.62
CSDE1-213ENST00000530784 RPL36Q9Y3U8 105 aaKnown RBP4.91□□□□□ -1.62
CSDE1-213ENST00000530784 DNAH9Q9NYC9 4486 aa4.9□□□□□ -1.62
CSDE1-213ENST00000530784 TRAV9-2A0A087WT02 112 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 TRAV41A0A0B4J266 112 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 G3V318 75 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 I3L521 148 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 OVOL1O14753 267 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 LANCL1O43813 399 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 ATP5HO75947 161 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 HLA-DRB1P01911 266 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 HBZP02008 142 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 LIMS3P0CW19 117 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 LIMS4P0CW20 117 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 ACTBP60709 375 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 RUNX1Q01196 453 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 C2orf76Q3KRA6 126 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 CT45A1Q5HYN5 189 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 SYT6Q5T7P8 510 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-213ENST00000530784 XAF1Q6GPH4 301 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 RAB12Q6IQ22 244 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 SBSPONQ8IVN8 264 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 CBR4Q8N4T8 237 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF491Q8N8L2 437 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 OR4K15Q8NH41 348 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms