RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ADAT3Q96EY9 351 aaPredicted RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 GALNT14Q96FL9 552 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 BMFQ96LC9 184 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 IP6K3Q96PC2 410 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 OR5B12Q96R08 314 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 CHST5Q9GZS9 411 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 TOLLIPQ9H0E2 274 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 SLC35B3Q9H1N7 401 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 WFDC1Q9HC57 220 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 OR2S2Q9NQN1 319 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 C19orf12Q9NSK7 152 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 FAM206AQ9NX38 181 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 SPRR3Q9UBC9 169 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 V9GYY9 64 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 CPAMD8Q8IZJ3 1885 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 PTPRSQ13332 1948 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 MPDZO75970 2070 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 DOCK9Q9BZ29 2069 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SCN2AQ99250 2005 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 TMED7-TICAM2A0A0A6YYA0 188 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 TMEM269A0A1B0GVZ9 245 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 TLCD2A6NGC4 264 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 CRYM-AS1A6NIL9 109 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 ARGFXA6NJG6 315 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SEC14L6B5MCN3 397 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 UMAD1C9J7I0 102 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 K7EPK0 472 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 AGPAT2O15120 278 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SLC31A1O15431 190 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SOCS1O15524 211 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 TGOLN2O43493 480 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 MPZL1O95297 269 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 AHSA1O95433 338 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 IFNA21P01568 189 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 IGLV3-1P01715 115 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 PRB2P02812 416 aaPredicted RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 IGKV3-11P04433 115 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 KLK3P07288 261 aaPredicted RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 HIST1H1BP16401 226 aaKnown RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 ZNF823P16415 610 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 ZNF93P35789 620 aaPredicted RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 RBMXP38159 391 aaKnown RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 CEACAM6P40199 344 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 AKR1C3P42330 323 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 GABRA4P48169 554 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 RBP2P50120 134 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 POLR2HP52434 150 aaKnown RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 TMEM33P57088 247 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SLC35A1P78382 337 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SLC10A1Q14973 349 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 NNATQ16517 81 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 IAH1Q2TAA2 248 aaPredicted RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 OTPQ5XKR4 325 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 GLIPR1L1Q6UWM5 242 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 COX15Q7KZN9 410 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 BHLHA15Q7RTS1 189 aaPredicted RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 DCXRQ7Z4W1 244 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 FAM71E2Q8N5Q1 922 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 FAM24BQ8N5W8 94 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 NOXO1Q8NFA2 376 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 OR5D14Q8NGL3 314 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 OR13D1Q8NGV5 346 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 OR10G6Q8NH81 332 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 MFSD8Q8NHS3 518 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 FNDC9Q8TBE3 224 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 PHOSPHO2Q8TCD6 241 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 GPR119Q8TDV5 335 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 CPNE4Q96A23 557 aaPredicted RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 C14orf144Q96I85 54 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 GABRG3Q99928 467 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 NICN1Q9BSH3 213 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 PBDC1Q9BVG4 233 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 PBOV1Q9GZY1 135 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 C11orf1Q9H5F2 150 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 PTGES2Q9H7Z7 377 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 METTL8Q9H825 291 aaKnown RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 PATZ1Q9HBE1 687 aaKnown RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 FAM60AQ9NP50 221 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 ZDHHC4Q9NPG8 344 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 SIRT7Q9NRC8 400 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 MMACHCQ9Y4U1 282 aa3.16□□□□□ -1.9
USP47-209ENST00000530041 GOLGA4Q13439 2230 aaKnown RBP3.16□□□□□ -1.9
USP47-209ENST00000530041 IGKV1D-8A0A087WSZ0 117 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 IGKV3D-11A0A0A0MRZ8 115 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 IGKV1D-43A0A0B4J1Z2 117 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 C5orf67F2Z3F1 127 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 MKRN2OSH3BPM6 223 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 K7ENP7 123 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 M0R036 132 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 TNFSF11O14788 317 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
USP47-209ENST00000530041 SLC31A2O15432 143 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 SNAI2O43623 268 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 MPDU1O75352 247 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 HBE1P02100 147 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 ARG1P05089 322 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 SRP19P09132 144 aaKnown RBP3.15□□□□□ -1.91
USP47-209ENST00000530041 CT45A10P0DMU9 189 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 GDF1P27539 372 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms