RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FKBP1AP62942 108 aaKnown RBP2.36□□□□□ -2.03
C11orf88-204ENST00000529661 FLI1Q01543 452 aaPredicted RBP2.36□□□□□ -2.03
C11orf88-204ENST00000529661 BIKQ13323 160 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 GRK1Q15835 563 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 GLT8D1Q68CQ7 371 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 TOMM20LQ6UXN7 152 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 Q6ZS49 121 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 RPRMLQ8N4K4 120 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 C12orf45Q8N5I9 185 aaPredicted RBP2.36□□□□□ -2.03
C11orf88-204ENST00000529661 KLK6Q92876 244 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 GPR146Q96CH1 333 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 NMNAT3Q96T66 252 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 GPER1Q99527 375 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 SPANXA1Q9NS26 97 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 KLK5Q9Y337 293 aaPredicted RBP2.36□□□□□ -2.03
C11orf88-204ENST00000529661 HSPB11Q9Y547 144 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 PHLDA3Q9Y5J5 127 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 MAST2Q6P0Q8 1798 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 TONSLQ96HA7 1378 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 NEO1Q92859 1461 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 hCG_1818297A0A087WSY0 165 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 PRORSD1PA6NEY8 169 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 SIGLEC16A6NMB1 481 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 A8MT66 165 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 A8MWP4 228 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 C9JCJ5 164 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 HMGB3O15347 200 aaKnown RBP2.35□□□□□ -2.03
C11orf88-204ENST00000529661 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 LGALS1P09382 135 aaKnown RBP2.35□□□□□ -2.03
C11orf88-204ENST00000529661 RBP1P09455 135 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 S100GP29377 79 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 ERP29P30040 261 aaKnown RBP2.35□□□□□ -2.03
C11orf88-204ENST00000529661 ALDH3A1P30838 453 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 PPP1CCP36873 323 aaKnown RBP2.35□□□□□ -2.03
C11orf88-204ENST00000529661 DEFA6Q01524 100 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 LDLRAD2Q5SZI1 272 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 GPHB5Q86YW7 130 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 ZFAND2AQ8N6M9 145 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 OR11G2Q8NGC1 345 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 OR13C8Q8NGS7 320 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 MRPL30Q8TCC3 161 aaKnown RBP2.35□□□□□ -2.03
C11orf88-204ENST00000529661 RAB2BQ8WUD1 216 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 AIF1LQ9BQI0 150 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 TMEM70Q9BUB7 260 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 TMEM222Q9H0R3 208 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 GABARAPL1Q9H0R8 117 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 ACER3Q9NUN7 267 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 SS18L2Q9UHA2 77 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 GINS2Q9Y248 185 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 LINC00588Q9Y4M8 146 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 ADAMTSL1Q8N6G6 1762 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 HECW1Q76N89 1606 aa2.35□□□□□ -2.03
C11orf88-204ENST00000529661 NUP160Q12769 1436 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SETD5Q9C0A6 1442 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 MAP1LC3B2A6NCE7 125 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 AIPO00170 330 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 PFDN1O60925 122 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1D-33P01593 117 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1-33P01594 117 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SMIM10L2AP0DMW4 78 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SMIM10L2BP0DMW5 78 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 PPIBP23284 216 aaKnown RBP2.34□□□□□ -2.03
C11orf88-204ENST00000529661 NCALDP61601 193 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 TBPL1P62380 186 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SMCO1Q147U7 214 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 OR8G1Q15617 311 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF283Q8N7M2 679 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 OR13D1Q8NGV5 346 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 CD200R1Q8TD46 325 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 GPR119Q8TDV5 335 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SKA2Q8WVK7 121 aaPredicted RBP2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SLC7A6Q92536 515 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 C12orf43Q96C57 262 aaKnown RBP2.34□□□□□ -2.03
C11orf88-204ENST00000529661 ERMAPQ96PL5 475 aaPredicted RBP2.34□□□□□ -2.03
C11orf88-204ENST00000529661 MAP1LC3BQ9GZQ8 125 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 WDR61Q9GZS3 305 aaKnown RBP2.34□□□□□ -2.03
C11orf88-204ENST00000529661 CCDC90BQ9GZT6 254 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 CHST6Q9GZX3 395 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 FBXL12Q9NXK8 326 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 SLC23A2Q9UGH3 650 aa2.34□□□□□ -2.03
C11orf88-204ENST00000529661 DENND4CQ5VZ89 1909 aa2.34□□□□□ -2.04
C11orf88-204ENST00000529661 NID2Q14112 1375 aa2.34□□□□□ -2.04
C11orf88-204ENST00000529661 XIRP1Q702N8 1843 aaKnown RBP2.33□□□□□ -2.04
C11orf88-204ENST00000529661 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 NYNRINQ9P2P1 1898 aaKnown RBP2.33□□□□□ -2.04
C11orf88-204ENST00000529661 TRBV24-1A0A075B6N3 115 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 TRAV4A0A0B4J268 109 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 A0A0J9YY10 115 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 A0A1B0GX78 115 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 IGSF23A1L1A6 192 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 H7C1C5 153 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 SLC17A3O00476 420 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 KPNA4O00629 521 aaPredicted RBP2.33□□□□□ -2.04
C11orf88-204ENST00000529661 SH2D1AO60880 128 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 NDUFC2O95298 119 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 PPBPP02775 128 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 TRGV3P03979 118 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms