RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 UCP1P25874 307 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 RPL12P30050 165 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 P2RY1P47900 373 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 THBS3P49746 956 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 EDDM3AQ14507 147 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 MSMO1Q15800 293 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 KHDC1LQ5JSQ8 128 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 MINOS1Q5TGZ0 78 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 TMEM268Q5VZI3 342 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 THOC7Q6I9Y2 204 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 TRAT1Q6PIZ9 186 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 ZNF329Q86UD4 541 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 SELENOHQ8IZQ5 122 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 FAM71E2Q8N5Q1 922 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 ZBTB34Q8NCN2 500 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 BVESQ8NE79 360 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 OR10V1Q8NGI7 309 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 PLPPR1Q8TBJ4 325 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 RRNAD1Q96FB5 475 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 DUX3Q96PT4 197 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 TP53RKQ96S44 253 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 SLC25A33Q9BSK2 321 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 TMEM133Q9H2Q1 129 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 ZC4H2Q9NQZ6 224 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 CCL28Q9NRJ3 127 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 CYTL1Q9NRR1 136 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 SDHAF2Q9NX18 166 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 LSM4Q9Y4Z0 139 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 MINOS1-NBL1R4GNA1 71 aa6.74□□□□□ -1.33
TGFBR3-208ENST00000529608 MFSD2BA6NFX1 497 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 KRBOX1C9JBD0 128 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 FGF16O43320 207 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 PSPNO60542 156 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 PGLYRP1O75594 196 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 MBPP02686 304 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 GAPDHP04406 335 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 SNRNP70P08621 437 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 SLC25A6P12236 298 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 PVALBP20472 110 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 VDAC1P21796 283 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 F2RP25116 425 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 PAX5Q02548 391 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 GNMTQ14749 295 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 HMGN3Q15651 99 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 ZNF818PQ6ZRF7 136 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 CCDC28AQ8IWP9 274 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 OR4X2Q8NGF9 303 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 OR4D5Q8NGN0 318 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 RNF141Q8WVD5 230 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 CLEC7AQ9BXN2 247 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 TOLLIPQ9H0E2 274 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 TAF9BQ9HBM6 251 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 LSM5Q9Y4Y9 91 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 U3KQK5 164 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 TENM2Q9NT68 2774 aa6.73□□□□□ -1.33
TGFBR3-208ENST00000529608 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 BORCS7-ASMTA0A0B4J1R7 106 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 IGKV1D-13A0A0B4J2D9 117 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 MSGN1A6NI15 193 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 HSD17B6O14756 317 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 HSPA12AO43301 675 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 FGF2P09038 288 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 IGKV1-13P0DP09 117 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 HTR1DP28221 377 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 RPL23AP62750 156 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 MEF2CQ06413 473 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 C9orf152Q5JTZ5 239 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 TOR2AQ5JU69 321 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 PRAMEF5Q5TYX0 476 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 FOXRED2Q8IWF2 684 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 TCTEX1D1Q8N7M0 179 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 SLC35G3Q8N808 338 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 LHFPL5Q8TAF8 219 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 PCNPQ8WW12 178 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 GALMQ96C23 342 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 SAT2Q96F10 170 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 SNX22Q96L94 193 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 CXorf58Q96LI9 332 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 NOL4LQ96MY1 436 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 RBM14Q96PK6 669 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 PRR25Q96S07 402 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 P2RX4Q99571 388 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 ASCL2Q99929 193 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 NCOR1P1Q9H4R4 102 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 LINC00527Q9UJ94 153 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 LINC00312Q9Y6C7 94 aa6.72□□□□□ -1.33
TGFBR3-208ENST00000529608 A0A1B0GU03 582 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 hADV38S2A0JD32 116 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 RAB19A4D1S5 217 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 LINC01548A6NM66 108 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 LY6LH3BQJ8 138 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 SCGB1D2O95969 90 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 SERPINE2P07093 398 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 GZMHP20718 246 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 ZP3P21754 424 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 CEACAM6P40199 344 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 NKX2-1P43699 371 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 OR3A1P47881 315 aa6.71□□□□□ -1.34
TGFBR3-208ENST00000529608 UQCC3Q6UW78 93 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms