RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 BRI3O95415 125 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 CA2P00918 260 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 IGLV2-23P01705 113 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 OPN1MWP04001 364 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 RLN2P04090 185 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 CRYGBP07316 175 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TRAPPC2P0DI81 140 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TRAPPC2BP0DI82 140 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 OPN1MW2P0DN77 364 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 OPN1MW3P0DN78 364 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 VSIG10L2P0DP72 767 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 SNCAP37840 140 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 CRIP2P52943 208 aaPredicted RBP6.3□□□□□ -1.4
SSBP3-211ENST00000528787 HSPE1P61604 102 aaKnown RBP6.3□□□□□ -1.4
SSBP3-211ENST00000528787 GNB1P62873 340 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 SUPT4H1P63272 117 aaKnown RBP6.3□□□□□ -1.4
SSBP3-211ENST00000528787 CX3CL1P78423 397 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 FGL1Q08830 312 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TATDN3Q17R31 274 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TEX38Q6PEX7 206 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TMEM65Q6PI78 240 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 SSX9Q7RTT3 188 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 CENPVQ7Z7K6 275 aaPredicted RBP6.3□□□□□ -1.4
SSBP3-211ENST00000528787 MED28Q9H204 178 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 SLA2Q9H6Q3 261 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 ZNF430Q9H8G1 570 aaPredicted RBP6.3□□□□□ -1.4
SSBP3-211ENST00000528787 PLEKHA3Q9HB20 300 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TMEM14BQ9NUH8 114 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
SSBP3-211ENST00000528787 FLVCR2Q9UPI3 526 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 OR51B2Q9Y5P1 312 aa6.3□□□□□ -1.4
SSBP3-211ENST00000528787 TRAV41A0A0B4J266 112 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 A0A0G2JLM5 398 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 C7orf66A4D0T2 115 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 PSMB11A5LHX3 300 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 INS-IGF2F8WCM5 200 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 ELANEP08246 267 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 IL6RP08887 468 aaPredicted RBP6.29□□□□□ -1.4
SSBP3-211ENST00000528787 DEFA4P12838 97 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 PRCDQ00LT1 54 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 AARDQ4LEZ3 155 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 PDLIM3Q53GG5 364 aaPredicted RBP6.29□□□□□ -1.4
SSBP3-211ENST00000528787 NMSQ5H8A3 153 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 CXorf66Q5JRM2 361 aaPredicted RBP6.29□□□□□ -1.4
SSBP3-211ENST00000528787 LURAP1LQ8IV03 231 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 UXS1Q8NBZ7 420 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 SRSF12Q8WXF0 261 aaKnown RBP6.29□□□□□ -1.4
SSBP3-211ENST00000528787 DUX5Q96PT3 197 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 GPHA2Q96T91 129 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 ESM1Q9NQ30 184 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 PARP11Q9NR21 331 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 CACNG5Q9UF02 275 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 U3KQ87 197 aa6.29□□□□□ -1.4
SSBP3-211ENST00000528787 NIPBLQ6KC79 2804 aaeCLIP6.28□□□□□ -1.4
SSBP3-211ENST00000528787 IGHV7-81A0A0B4J1V7 117 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 SRRM4A7MD48 611 aaKnown RBP6.28□□□□□ -1.4
SSBP3-211ENST00000528787 NPIPB5A8MRT5 1133 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 CEBPZOSA8MTT3 80 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 CHST1O43916 411 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 HOXB5P09067 269 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 OR9G9P0C7N8 305 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 PAX6P26367 422 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 HTR2BP41595 481 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-211ENST00000528787 HOXA1P49639 335 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-211ENST00000528787 LINC00205P59089 165 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 RAB11AP62491 216 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 RELBQ01201 579 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 FOXE3Q13461 319 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 IAH1Q2TAA2 248 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-211ENST00000528787 ANKRD55Q3KP44 614 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 GGNBP1Q5YKI7 109 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 UNQ5815/PRO19632Q6UWF5 114 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 Q6ZSV7 163 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 LYZL2Q7Z4W2 148 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 STPG2Q8N412 459 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 GRPEL2Q8TAA5 225 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 USMG5Q96IX5 58 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 C2orf50Q96LR7 162 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 RAB40CQ96S21 281 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 NMES1Q9C002 83 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 ZNF702PQ9H963 129 aa6.28□□□□□ -1.4
SSBP3-211ENST00000528787 SOX21Q9Y651 276 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-211ENST00000528787 C13orf42A0A1B0GVH6 325 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 RPS10-NUDT3A0A1W2PQS6 291 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 MSGN1A6NI15 193 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 FAM223BA6NKX1 122 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 FAM25EA8MYX2 175 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 L7N2F9 121 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 ST8SIA3O43173 380 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 IGKV1-39P01597 117 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 IGKV1-5P01602 117 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 IGKV1D-39P04432 117 aa6.27□□□□□ -1.41
SSBP3-211ENST00000528787 AMY1AP04745 511 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms