RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 VAX1Q5SQQ9 334 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 CD300LFQ8TDQ1 290 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 EXTL2Q9UBQ6 330 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 SMAD5-AS1Q9Y6J3 95 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 S4R3C0 116 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 M0QYG6 137 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 UPK2O00526 184 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 RGS5O15539 181 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 DHFRP00374 187 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 F2RP25116 425 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 PSMB6P28072 239 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 LPAR6P43657 344 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 CLVS1Q8IUQ0 354 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-213ENST00000527897 COMMD5Q9GZQ3 224 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
CAPN1-213ENST00000527897 PPP5D1E7EU14 171 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 BMPR1BO00238 502 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 NDUFB8O95169 186 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 KRASP01116 189 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 S100GP29377 79 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 ALDH3B2P48448 385 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 FCAMRQ8WWV6 532 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
CAPN1-213ENST00000527897 HINT2Q9BX68 163 aa11.87□□□□□ -0.51
CAPN1-213ENST00000527897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.86□□□□□ -0.51
CAPN1-213ENST00000527897 CGB1A6NKQ9 187 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 HLA-AP01891 365 aaKnown RBP11.86□□□□□ -0.51
CAPN1-213ENST00000527897 IFNA6P05013 189 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 CTRB1P17538 263 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 G6PCP35575 357 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 OR2B8PP59922 312 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 SPCS2Q15005 226 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 CTRB2Q6GPI1 263 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 LPCAT3Q6P1A2 487 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 KLK11Q9UBX7 282 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 NSG2Q9Y328 171 aa11.86□□□□□ -0.51
CAPN1-213ENST00000527897 CRYGCP07315 174 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 PGAM2P15259 253 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 RNASE10Q5GAN6 216 aaKnown RBP11.85□□□□□ -0.51
CAPN1-213ENST00000527897 CLEC19AQ6UXS0 136 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 EEF1AKMT3Q96AZ1 226 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 QTRT1Q9BXR0 403 aaKnown RBP11.85□□□□□ -0.51
CAPN1-213ENST00000527897 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
CAPN1-213ENST00000527897 SNAPC5O75971 98 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 OR2C1O95371 312 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 CD3DP04234 171 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 CSN3P07498 182 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-213ENST00000527897 HIST1H1BP16401 226 aaKnown RBP11.84□□□□□ -0.51
CAPN1-213ENST00000527897 ARL3P36405 182 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 ZNF585BQ52M93 769 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 LAX1Q8IWV1 398 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 ABHD1Q96SE0 405 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 ZC4H2Q9NQZ6 224 aa11.84□□□□□ -0.51
CAPN1-213ENST00000527897 TEX50A0A1B0GTY4 177 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 IGLC7A0M8Q6 106 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 MFSD2BA6NFX1 497 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 H0Y980 276 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 CTDSP2O14595 271 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 NOL3O60936 208 aaKnown RBP11.83□□□□□ -0.52
CAPN1-213ENST00000527897 GGCTO75223 188 aaKnown RBP11.83□□□□□ -0.52
CAPN1-213ENST00000527897 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 OR13C7P0DN81 318 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 PI3P19957 117 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 MECP2P51608 486 aaKnown RBP11.83□□□□□ -0.52
CAPN1-213ENST00000527897 OR1L8Q8NGR8 309 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 CCDC140Q96MF4 163 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 MIXL1Q9H2W2 232 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 OR51B2Q9Y5P1 312 aa11.83□□□□□ -0.52
CAPN1-213ENST00000527897 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 PPP5CP53041 499 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 FAM209BQ5JX69 171 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 LCN12Q6JVE5 192 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 SLC25A24Q6NUK1 477 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 RAB2BQ8WUD1 216 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 C15orf40Q8WUR7 153 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 MTFP1Q9UDX5 166 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 U3KQK5 164 aa11.82□□□□□ -0.52
CAPN1-213ENST00000527897 ZNF320A2RRD8 509 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 IZUMO1RA6ND01 250 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 CYB5BO43169 146 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 SERPINE2P07093 398 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 EDN2P20800 178 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms