RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 IGLC7A0M8Q6 106 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF785A8K8V0 405 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 A8MZ25 164 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 OR2C1O95371 312 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 NQO2P16083 231 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 ELK1P19419 428 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 HLA-DMAP28067 261 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 PRSS3P35030 304 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 TAS2R31P59538 309 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 CATR1Q13166 79 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 TATDN3Q17R31 274 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF585BQ52M93 769 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 AADACL3Q5VUY0 350 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 GPX8Q8TED1 209 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 KCTD12Q96CX2 325 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 PLEKHA2Q9HB19 425 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 HRASLSQ9HDD0 168 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 VCX3AQ9NNX9 186 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 TMEM140Q9NV12 185 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 SELENOKQ9Y6D0 94 aa7.9□□□□□ -1.14
PRPF40B-204ENST00000527253 DPPA5A6NC42 116 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 MFSD2BA6NFX1 497 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 H0Y980 276 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 HPGDSO60760 199 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 RLN1P04808 185 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 HRH1P35367 487 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 LPAR6P43657 344 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 HERV-K104P61576 105 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 CTF1Q16619 201 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 CD300EQ496F6 205 aaPredicted RBP7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 CLEC19AQ6UXS0 136 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 OR10W1Q8NGF6 305 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 OR5H2Q8NGV7 314 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 FCAMRQ8WWV6 532 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 TM2D3Q9BRN9 247 aa7.89□□□□□ -1.15
PRPF40B-204ENST00000527253 TEX50A0A1B0GTY4 177 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 C2orf70A6NJV1 201 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 GGCTO75223 188 aaKnown RBP7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 APOA1P02647 267 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 FOLR2P14207 255 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 F2RP25116 425 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 ARL3P36405 182 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 TAS2R46P59540 309 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 WT1-ASQ06250 92 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 DEFB114Q30KQ6 69 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 GPHB5Q86YW7 130 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 SNX29P2Q8IUI4 249 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 SGPP2Q8IWX5 399 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 Q8N402 240 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 CD300LFQ8TDQ1 290 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 CACNG8Q8WXS5 425 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 CMTM3Q96MX0 182 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 AIFM2Q9BRQ8 373 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 ZC4H2Q9NQZ6 224 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 COMMD9Q9P000 198 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 NSG2Q9Y328 171 aa7.88□□□□□ -1.15
PRPF40B-204ENST00000527253 DBX1A6NMT0 343 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 LGALS9O00182 355 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 GPR31O00270 319 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 CLEC3BP05452 202 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 CD7P09564 240 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 HIST1H1BP16401 226 aaKnown RBP7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 G6PCP35575 357 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 MFAP2P55001 183 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 HAGHQ16775 308 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 PHLDA2Q53GA4 152 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 LCN12Q6JVE5 192 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 LINC00322Q6ZN03 302 aaPredicted RBP7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 DMBX1Q8NFW5 382 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 OR2K2Q8NGT1 345 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 OR6F1Q8NGZ6 308 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 ZNF502Q8TBZ5 544 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 EEF1AKMT3Q96AZ1 226 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 DGCR14Q96DF8 476 aaKnown RBP7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 COMMD5Q9GZQ3 224 aa7.87□□□□□ -1.15
PRPF40B-204ENST00000527253 TMEM213A2RRL7 107 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 MARCH11A6NNE9 402 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 C3orf84H3BNL1 204 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 GABARAPO95166 117 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 DHFRP00374 187 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 KRASP01116 189 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 IGKV1-39P01597 117 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 IGKV1D-39P04432 117 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 FGF2P09038 288 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 TRAPPC2P0DI81 140 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 TRAPPC2BP0DI82 140 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 DEFA4P12838 97 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 CBLN1P23435 193 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 RORCP51449 518 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 RNASE12Q5GAN4 147 aaKnown RBP7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 FAM209BQ5JX69 171 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 UNQ9165/PRO28630Q6UXU0 137 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 MUC7Q8TAX7 377 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 WDR89Q96FK6 387 aaPredicted RBP7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 SRSF8Q9BRL6 282 aaKnown RBP7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 QTRT1Q9BXR0 403 aaKnown RBP7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 WFDC10AQ9H1F0 79 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 ZMAT4Q9H898 229 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 SCPEP1Q9HB40 452 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms