RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CPSF4O95639 269 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 FADS2O95864 444 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 OR2H2O95918 312 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 SERPINA3P01011 423 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 IFNGP01579 166 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TRGV3P03979 118 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ISG15P05161 165 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 REG1AP05451 166 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 BPGMP07738 259 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 LYNP07948 512 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 UBCP0CG48 685 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 ZNF705DP0CH99 300 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 ZNF705BP0CI00 300 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 SPART-AS1P0CW21 52 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MT1HL1P0DM35 61 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 RRASP10301 218 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 IFI30P13284 250 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ALOX5APP20292 161 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 PTBP1P26599 531 aaKnown RBP eCLIP0.97□□□□□ -2.25
CD44-212ENST00000524922 IL12AP29459 219 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MAS1LP35410 378 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 NUP62P37198 522 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 RANBP1P43487 201 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 OMPP47874 163 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 GSSP48637 474 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 RBP2P50120 134 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 GZMMP51124 257 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ZNF121P58317 390 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 FXYD6P3P58550 94 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TPPP2P59282 170 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 SELENOWP63302 87 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 HOXC5Q00444 222 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 PJVKQ0ZLH3 352 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 BNIP1Q12981 228 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MRPL28Q13084 256 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 PDZK1IP1Q13113 114 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TMED1Q13445 227 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TPBGQ13641 420 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 LAGE3Q14657 143 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 C12orf74Q32Q52 190 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 LRRC37A5PQ49AS3 106 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 LELP1Q5T871 98 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 LINC01590Q5TEZ4 76 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 PRAMEF5Q5TYX0 476 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CAVIN1Q6NZI2 390 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 BTNL8Q6UX41 500 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 DLEU7Q6UYE1 221 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MOB1BQ7L9L4 216 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TRAPPC6BQ86SZ2 158 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CROCCP2Q86T23 111 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 PPP1R27Q86WC6 154 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CDH26Q8IXH8 852 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MSRB3Q8IXL7 192 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 NRMQ8IXM6 262 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ZNF679Q8IYX0 411 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 FAM58AQ8N1B3 248 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TPRX1Q8N7U7 411 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ZNF781Q8N8C0 355 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 UXS1Q8NBZ7 420 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 BEST4Q8NFU0 473 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 OR2T33Q8NG76 320 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 OR6F1Q8NGZ6 308 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 OR11H2Q8NH07 326 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 OR2AE1Q8NHA4 323 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 PFN4Q8NHR9 129 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 VSTM2AQ8TAG5 236 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 FAM81AQ8TBF8 368 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TRMT10AQ8TBZ6 339 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 VN1R17PQ8TDU5 208 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 SLC26A7Q8TE54 656 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MAL2Q969L2 176 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TAMM41Q96BW9 452 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 BSCL2Q96G97 398 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 COQ2Q96H96 371 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 Q96M85 177 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 INTS14Q96SY0 518 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 RTBDNQ9BSG5 229 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 ALKBH7Q9BT30 221 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 C1orf50Q9BV19 199 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TMEM109Q9BVC6 243 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MROQ9BYG7 248 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ANKRD60Q9BZ19 345 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ROPN1BQ9BZX4 212 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 YIPF3Q9GZM5 350 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 NXF2Q9GZY0 626 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 ELL3Q9HB65 397 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 ADGRL4Q9HBW9 690 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CMC2Q9NRP2 79 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TMEM14BQ9NUH8 114 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 PAK1IP1Q9NWT1 392 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 SLC25A37Q9NYZ2 338 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MTCH1Q9NZJ7 389 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 LGALS13Q9UHV8 139 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 SNX24Q9Y343 169 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 EXOSC1Q9Y3B2 195 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 MRPS16Q9Y3D3 137 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 SAMHD1Q9Y3Z3 626 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 SNX5Q9Y5X3 404 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ETV7Q9Y603 341 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TRAV18A0A075B6X5 111 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms