RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ADGRG4Q8IZF6 3080 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 SMPD2O60906 423 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 OR10J4P0C629 311 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 NTF3P20783 257 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 MMD2Q8IY49 270 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 TBL2Q9Y4P3 447 aaKnown RBP10.91□□□□□ -0.66
CAPN1-202ENST00000524773 KMT2EQ8IZD2 1858 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 IGHV3OR15-7A0A075B7D8 119 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 M0R1X1 148 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 CRYBB3P26998 211 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 ARG2P78540 354 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 ZNF146Q15072 292 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 TRIP6Q15654 476 aaKnown RBP10.91□□□□□ -0.66
CAPN1-202ENST00000524773 TEX43Q6ZNM6 134 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 MIR17HGQ75NE6 70 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 C11orf42Q8N5U0 333 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 STPG4Q8N801 248 aa10.91□□□□□ -0.66
CAPN1-202ENST00000524773 DIRC3C9JPN6 131 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 M0R296 226 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 RAB29O14966 203 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 SIAH2O43255 324 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 AMTP48728 403 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 MLANAQ16655 118 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 VWC2Q2TAL6 325 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 ATP1A1-AS1Q5TC04 95 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 PQLC2Q6ZP29 291 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 OR4A16Q8NH70 328 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 GP6Q9HCN6 339 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 GCM1Q9NP62 436 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 FOXJ2Q9P0K8 574 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 POLDIP2Q9Y2S7 368 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 HEATR1Q9H583 2144 aaKnown RBP10.9□□□□□ -0.66
CAPN1-202ENST00000524773 YPEL3P61236 119 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-202ENST00000524773 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 ABHD17BQ5VST6 288 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 SIGLECL1Q8N7X8 197 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-202ENST00000524773 SERTAD4Q9NUC0 356 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
CAPN1-202ENST00000524773 STAG3L2P0CL84 134 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 STAG3L3P0CL85 134 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 GCHFRP30047 84 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 DUSP3P51452 185 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 ZNF134P52741 427 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 MRPS11P82912 194 aaKnown RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 HTD2P86397 168 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 CIB3Q96Q77 187 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 NTN3O00634 580 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 IL6RP08887 468 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 MGST1P10620 155 aaKnown RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 IGFBP2P18065 325 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 GPR12P47775 334 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 PCP4P48539 62 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 RAB7AP51149 207 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 EFNB3Q15768 340 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 TBC1D28Q2M2D7 210 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 LHFPL4Q7Z7J7 247 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 STPG3Q8N7X2 389 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 FAM173AQ9BQD7 235 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 OPN3Q9H1Y3 402 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 DNAJC4Q9NNZ3 241 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 DCAF16Q9NXF7 216 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 MGAQ8IWI9 3026 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 OOEPA6NGQ2 149 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 PRB4P10163 310 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-202ENST00000524773 LGALS4P56470 323 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
CAPN1-202ENST00000524773 CEP250Q9BV73 2442 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 CHRNB4P30926 498 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 UBE2NP61088 152 aaKnown RBP10.88□□□□□ -0.67
CAPN1-202ENST00000524773 CENPWQ5EE01 88 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 ZNF766Q5HY98 468 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 RNFT1Q5M7Z0 435 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 FAM201AQ5SY85 155 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 DCAF12Q5T6F0 453 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 Q8N976 141 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 KLF14Q8TD94 323 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-202ENST00000524773 EAF1Q96JC9 268 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-202ENST00000524773 HSD17B10Q99714 261 aaKnown RBP10.88□□□□□ -0.67
CAPN1-202ENST00000524773 NRN1Q9NPD7 142 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 ZNRD1Q9P1U0 126 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 GFRA3O60609 400 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 CXorf1O96002 111 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 IGHV3-48P01763 117 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 CD99P14209 185 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 SRIP30626 198 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 PSG5Q15238 335 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 FAM168AQ92567 244 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 SGK494Q96LW2 274 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 ABCA1O95477 2261 aa10.88□□□□□ -0.67
CAPN1-202ENST00000524773 SFTPCP11686 197 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 DUTP33316 252 aaKnown RBP10.87□□□□□ -0.67
CAPN1-202ENST00000524773 HINT1P49773 126 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-202ENST00000524773 SPRNQ5BIV9 151 aa10.87□□□□□ -0.67
CAPN1-202ENST00000524773 HES3Q5TGS1 186 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms