RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TOX4O94842 621 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 IGKV1-16P04430 117 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 IL6RP08887 468 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-212ENST00000524330 PAX1P15863 534 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 SLC25A16P16260 332 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 VDAC2P45880 294 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-212ENST00000524330 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-212ENST00000524330 PEA15Q15121 130 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 PLGLAQ15195 96 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 UTF1Q5T230 341 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 VMO1Q7Z5L0 202 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 OR4P4Q8NGL7 312 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 FAM213BQ8TBF2 198 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 C10orf105Q8TEF2 133 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 IGFBPL1Q8WX77 278 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 TAF15Q92804 592 aaKnown RBP eCLIP8.09□□□□□ -1.11
VPS13B-212ENST00000524330 ZDHHC16Q969W1 377 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 OR4C12Q96R67 309 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 HRH4Q9H3N8 390 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 SIRT7Q9NRC8 400 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 POLR3KQ9Y2Y1 108 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-212ENST00000524330 ABCA4P78363 2273 aa8.09□□□□□ -1.11
VPS13B-212ENST00000524330 TEX50A0A1B0GTY4 177 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 SMCO3A2RU48 225 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 C15orf62A8K5M9 175 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 CYB5BO43169 146 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 NDUFS7O75251 213 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 ZP3P21754 424 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 FGF7P21781 194 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 BRS3P32247 399 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 LMO4P61968 165 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 LCN2P80188 198 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 VWC2Q2TAL6 325 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 ZNF295-AS1Q8N0V1 137 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 Q8N7P7 452 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 OR2T10Q8NGZ9 312 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 RBMXL1Q96E39 390 aaKnown RBP8.08□□□□□ -1.12
VPS13B-212ENST00000524330 SRSF8Q9BRL6 282 aaKnown RBP8.08□□□□□ -1.12
VPS13B-212ENST00000524330 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 NPVFQ9HCQ7 196 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 C1RLQ9NZP8 487 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 ZNRD1Q9P1U0 126 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 SPTBN1Q01082 2364 aaKnown RBP8.08□□□□□ -1.12
VPS13B-212ENST00000524330 ARID1AO14497 2285 aa8.08□□□□□ -1.12
VPS13B-212ENST00000524330 DSPP15924 2871 aaKnown RBP8.08□□□□□ -1.12
VPS13B-212ENST00000524330 TRAV3A0A0B4J244 114 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 ODF3BA8MYP8 253 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 LY6LH3BQJ8 138 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 CORTO00230 105 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 SLC25A17O43808 307 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 MOSP00540 346 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 IFNA1P01562 189 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
VPS13B-212ENST00000524330 UBE2E1P51965 193 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 ACOT6Q3I5F7 207 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-212ENST00000524330 C2orf83Q53S99 150 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 TMEM41BQ5BJD5 291 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 SPINK9Q5DT21 86 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 ETFRF1Q6IPR1 90 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 OR1L6Q8NGR2 347 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 C22orf15Q8WYQ4 148 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 MALSU1Q96EH3 234 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 NARS2Q96I59 477 aaKnown RBP8.07□□□□□ -1.12
VPS13B-212ENST00000524330 SLC35E1Q96K37 410 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 SIRPDQ9H106 197 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 TREM1Q9NP99 234 aa8.07□□□□□ -1.12
VPS13B-212ENST00000524330 BEX4Q9NWD9 120 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-212ENST00000524330 MALRD1Q5VYJ5 2156 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 SRRM4A7MD48 611 aaKnown RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 PMS2P5A8MQ11 134 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 CA2P00918 260 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 SNRNP70P08621 437 aaKnown RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 GATA3P23771 443 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 GPX4P36969 197 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 TAGLN2P37802 199 aaKnown RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 AKR1C1Q04828 323 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 HES1Q14469 280 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 PSG5Q15238 335 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 TOR2AQ5JU69 321 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 BTNL8Q6UX41 500 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 CENPVQ7Z7K6 275 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 CCDC28AQ8IWP9 274 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 RNASEH2CQ8TDP1 164 aaKnown RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 CACNG8Q8WXS5 425 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 REG4Q9BYZ8 158 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 SH3BGRL3Q9H299 93 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 NDUFA4L2Q9NRX3 87 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 METTL1Q9UBP6 276 aaKnown RBP8.06□□□□□ -1.12
VPS13B-212ENST00000524330 WDR83OSQ9Y284 106 aa8.06□□□□□ -1.12
VPS13B-212ENST00000524330 IGHV3-72A0A0B4J1Y9 119 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 A0A1W2PPI3 338 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 VWC2LB2RUY7 222 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 J3QKU1 62 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 RRHO14718 337 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 TIMM23O14925 209 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 NBR2O15453 112 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 IGLV2-23P01705 113 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 FAM106CPP0CH98 169 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms