RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	WFDC1	Q9HC57	220 aa		3.02	□□□□□ -1.93
SREK1-213	ENST00000523655	CISH	Q9NSE2	258 aa		3.02	□□□□□ -1.93
SREK1-213	ENST00000523655	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
SREK1-213	ENST00000523655	PLEC	Q15149	4684 aa	Known RBP	3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	IGHV2-26	A0A0B4J1V2	119 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655		A0A1W2PP18	115 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	GOLGA6L4	A6NEF3	574 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655		K7EIL1	84 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF861P	O60384	105 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	PLIN3	O60664	434 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	DCTN3	O75935	186 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	TCRB	P04435	133 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	PSMA1	P25786	263 aa	Known RBP	3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	ELK4	P28324	431 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	HSD11B1	P28845	292 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	PYCR1	P32322	319 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	PPP1R2	P41236	205 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	WNT4	P56705	351 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	SYCN	Q0VAF6	134 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	MPPED2	Q15777	294 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	TAF9	Q16594	264 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	TMEM176B	Q3YBM2	270 aa	Predicted RBP	3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	YIF1B	Q5BJH7	314 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	PPP1R2P3	Q6NXS1	205 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	FAM173B	Q6P4H8	233 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	LINC00596	Q86U02	117 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	RPS19BP1	Q86WX3	136 aa	Known RBP	3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	DEFB106A	Q8N104	65 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF555	Q8NEP9	628 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	GPR32P1	Q8NGA4	272 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	OR5W2	Q8NH69	310 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	TLCD1	Q96CP7	247 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	FXYD5	Q96DB9	178 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	NARS2	Q96I59	477 aa	Known RBP	3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	PRAP1	Q96NZ9	151 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF382	Q96SR6	550 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	LINC01587	Q99440	93 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF337	Q9Y3M9	751 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	DOCK4	Q8N1I0	1966 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	DNAH10	Q8IVF4	4471 aa		3.01	□□□□□ -1.93
SREK1-213	ENST00000523655	STARD9	Q9P2P6	4700 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TRGV5	A0A0B4J1U4	118 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	COX7A2P2	O60397	106 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	CYB5R3	P00387	301 aa	Predicted RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	HLA-DQA1	P01909	254 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	SNRPA	P09012	282 aa	Known RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	FREM3	P0C091	2139 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	HIST1H1E	P10412	219 aa	Known RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF823	P16415	610 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	ME2	P23368	584 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	RPL12	P30050	165 aa	Known RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	CBX5	P45973	191 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	MRPS25	P82663	173 aa	Known RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	FMOD	Q06828	376 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	AES	Q08117	197 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TSPAN31	Q12999	210 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	PAFAH1B3	Q15102	231 aa	Known RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	PDK2	Q15119	407 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TEX30	Q5JUR7	227 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	SAXO2	Q658L1	398 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	ZFAND6	Q6FIF0	208 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	TRAPPC5	Q8IUR0	188 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TMEM256	Q8N2U0	113 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TAMM41	Q96BW9	452 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	PHYHIPL	Q96FC7	376 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF799	Q96GE5	643 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	YPEL4	Q96NS1	127 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	B9D2	Q9BPU9	175 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	TTTY12	Q9BZ98	90 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	SND1-IT1	Q9HBX3	110 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNRD1	Q9P1U0	126 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	RPUSD1	Q9UJJ7	312 aa	Known RBP	3	□□□□□ -1.93
SREK1-213	ENST00000523655	ALG5	Q9Y673	324 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF780B	Q9Y6R6	833 aa		3	□□□□□ -1.93
SREK1-213	ENST00000523655	IGLV3-12	A0A075B6K2	115 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	TRBV6-6	A0A0A6YYG2	114 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	IGKV1-6	A0A0C4DH72	117 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	TMEM223	A0PJW6	202 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	C2orf74	A8MZ97	194 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	TMEM250	H0YL14	139 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	PANO1	I0J062	215 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655		M0QYV0	167 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	LGALS9	O00182	355 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF207	O43670	478 aa	Known RBP	2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	IGKV1-39	P01597	117 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	IGKV1D-39	P04432	117 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	IFNA16	P05015	189 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	ELK1	P19419	428 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	CFL1	P23528	166 aa	Known RBP	2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	IMPA1	P29218	277 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	AGTR1	P30556	359 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	RAB25	P57735	213 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	SKP2	Q13309	424 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	PPP1R1A	Q13522	171 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF79	Q15937	498 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	AKIRIN2	Q53H80	203 aa		2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	MORN3	Q6PF18	240 aa	Predicted RBP	2.99	□□□□□ -1.93
SREK1-213	ENST00000523655	ZNF773	Q6PK81	442 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms