RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 UFC1Q9Y3C8 167 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 TSPAN4O14817 238 aa16.8■□□□□ 0.28
PVT1-218ENST00000523328 DEFA4P12838 97 aa16.8■□□□□ 0.28
PVT1-218ENST00000523328 CRHBPP24387 322 aa16.8■□□□□ 0.28
PVT1-218ENST00000523328 RPL8P62917 257 aaKnown RBP16.8■□□□□ 0.28
PVT1-218ENST00000523328 RCN1Q15293 331 aa16.8■□□□□ 0.28
PVT1-218ENST00000523328 SSX1Q16384 188 aa16.8■□□□□ 0.28
PVT1-218ENST00000523328 SSX9Q7RTT3 188 aa16.8■□□□□ 0.28
PVT1-218ENST00000523328 ZNF436Q9C0F3 470 aaPredicted RBP16.8■□□□□ 0.28
PVT1-218ENST00000523328 IFITM5A6NNB3 132 aa16.79■□□□□ 0.28
PVT1-218ENST00000523328 S1PR2O95136 353 aa16.79■□□□□ 0.28
PVT1-218ENST00000523328 CTXN2P0C2S0 81 aa16.79■□□□□ 0.28
PVT1-218ENST00000523328 MFSD4AQ8N468 514 aa16.79■□□□□ 0.28
PVT1-218ENST00000523328 ACOT13Q9NPJ3 140 aa16.79■□□□□ 0.28
PVT1-218ENST00000523328 METTL21EPA6NDL7 271 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 CASQ2O14958 399 aaPredicted RBP16.78■□□□□ 0.28
PVT1-218ENST00000523328 HLA-GP17693 338 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 PLET1Q6UQ28 207 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 TMEM190Q8WZ59 177 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 GPHA2Q96T91 129 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 DUSP21Q9H596 190 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 TAS2R8Q9NYW2 309 aa16.78■□□□□ 0.28
PVT1-218ENST00000523328 HRASP01112 189 aa16.77■□□□□ 0.28
PVT1-218ENST00000523328 RPL35AP18077 110 aaKnown RBP16.77■□□□□ 0.28
PVT1-218ENST00000523328 OR2B8PP59922 312 aa16.77■□□□□ 0.28
PVT1-218ENST00000523328 MAP6D1Q9H9H5 199 aa16.77■□□□□ 0.28
PVT1-218ENST00000523328 BET1LQ9NYM9 111 aa16.77■□□□□ 0.28
PVT1-218ENST00000523328 DNAH6Q9C0G6 4158 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 TRAV1-2A0A0B4J238 106 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 IGLC7A0M8Q6 106 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 PDCD5O14737 125 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 PTBP1P26599 531 aaKnown RBP eCLIP16.76■□□□□ 0.27
PVT1-218ENST00000523328 FCGR2BP31994 310 aaPredicted RBP16.76■□□□□ 0.27
PVT1-218ENST00000523328 ARL6IP1Q15041 203 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 TIMM50Q3ZCQ8 353 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 CDNFQ49AH0 187 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 CNIH2Q6PI25 160 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 ZNF66Q6ZN08 573 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 MGLLQ99685 303 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 DCSTAMPQ9H295 470 aa16.76■□□□□ 0.27
PVT1-218ENST00000523328 TGOLN2O43493 480 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 PRR20EP86478 221 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 PRR20CP86479 221 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 PRR20DP86480 221 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 PRR20BP86481 221 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 PRR20AP86496 221 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 HACD4Q5VWC8 232 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 OR4A5Q8NH83 315 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 GALNT14Q96FL9 552 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 ATG5Q9H1Y0 275 aa16.75■□□□□ 0.27
PVT1-218ENST00000523328 DAZ1Q9NQZ3 744 aaKnown RBP16.75■□□□□ 0.27
PVT1-218ENST00000523328 RGS10O43665 173 aa16.74■□□□□ 0.27
PVT1-218ENST00000523328 RPA2P15927 270 aa16.74■□□□□ 0.27
PVT1-218ENST00000523328 LAMTOR1Q6IAA8 161 aa16.74■□□□□ 0.27
PVT1-218ENST00000523328 TPRKBQ9Y3C4 175 aa16.74■□□□□ 0.27
PVT1-218ENST00000523328 NR2C2APQ86WQ0 139 aa16.73■□□□□ 0.27
PVT1-218ENST00000523328 VN1R17PQ8TDU5 208 aa16.73■□□□□ 0.27
PVT1-218ENST00000523328 GATAD1Q8WUU5 269 aa16.73■□□□□ 0.27
PVT1-218ENST00000523328 NUDCD2Q8WVJ2 157 aa16.73■□□□□ 0.27
PVT1-218ENST00000523328 HRASLSQ9HDD0 168 aa16.73■□□□□ 0.27
PVT1-218ENST00000523328 THYN1Q9P016 225 aa16.73■□□□□ 0.27
PVT1-218ENST00000523328 RYR1P21817 5038 aa16.72■□□□□ 0.27
PVT1-218ENST00000523328 TRAV3A0A0B4J244 114 aa16.72■□□□□ 0.27
PVT1-218ENST00000523328 OR4C46A6NHA9 309 aa16.72■□□□□ 0.27
PVT1-218ENST00000523328 OR5B3Q8NH48 314 aa16.72■□□□□ 0.27
PVT1-218ENST00000523328 SRSF8Q9BRL6 282 aaKnown RBP16.72■□□□□ 0.27
PVT1-218ENST00000523328 ANXA10Q9UJ72 324 aa16.72■□□□□ 0.27
PVT1-218ENST00000523328 TMEM235A6NFC5 223 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 OR2T8A6NH00 312 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 EBAG9O00559 213 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 TNFSF12O43508 249 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 RAB3BP20337 219 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 NANOS2P60321 138 aaKnown RBP16.71■□□□□ 0.27
PVT1-218ENST00000523328 APRG1Q8IVJ8 170 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 SPAG16Q8N0X2 631 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 AIFM2Q9BRQ8 373 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 VCXQ9H320 206 aa16.71■□□□□ 0.27
PVT1-218ENST00000523328 NDUFA4O00483 81 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 UPK2O00526 184 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 RBFOX2O43251 390 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■■□ 26.5
PVT1-218ENST00000523328 SSX5O60225 188 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 CTSDP07339 412 aaPredicted RBP16.7■□□□□ 0.26
PVT1-218ENST00000523328 POU2AF1Q16633 256 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 PRSS48Q7RTY5 328 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 OR10W1Q8NGF6 305 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 BSCL2Q96G97 398 aaPredicted RBP16.7■□□□□ 0.26
PVT1-218ENST00000523328 RARRES2Q99969 163 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 CCDC90BQ9GZT6 254 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 CCL28Q9NRJ3 127 aa16.7■□□□□ 0.26
PVT1-218ENST00000523328 MYL9P24844 172 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 MSMO1Q15800 293 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 ZNF124Q15973 351 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 ZNF773Q6PK81 442 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 GDPD1Q8N9F7 314 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 C11orf45Q8TAV5 145 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 CD300LFQ8TDQ1 290 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 CHRDL1Q9BU40 450 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 COMMD5Q9GZQ3 224 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 MFFQ9GZY8 342 aa16.69■□□□□ 0.26
PVT1-218ENST00000523328 CSTL1Q9H114 145 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms