RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PAFAH1B2P68402 229 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 UNC119Q13432 240 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 YIF1BQ5BJH7 314 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 IGSF11Q5DX21 431 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 ZNF66Q6ZN08 573 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 NKAIN3Q8N8D7 197 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 OR4A4PQ8NGN8 299 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 ZNRF2Q8NHG8 242 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 SLC29A1Q99808 456 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 THYN1Q9P016 225 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 MDFICQ9P1T7 246 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 TMED3Q9Y3Q3 217 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 TRBV6-7A0A0A0MS04 114 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 SOCS1O15524 211 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 LALBAP00709 142 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 GABRB1P18505 474 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 CELP19835 753 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 AMIGO2Q86SJ2 522 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 VSTM2AQ8TAG5 236 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 CABLES2Q9BTV7 478 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 ARL2BPQ9Y2Y0 163 aa9.81□□□□□ -0.84
NKX3-1-202ENST00000523261 IGHV3OR16-13A0A075B7E8 117 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 IGHV3-74A0A0B4J1X5 117 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 IGLC7A0M8Q6 106 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 FABP7O15540 132 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 SPART-AS1P0CW21 52 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 OR2B11Q5JQS5 317 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 TCF24Q7RTU0 167 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 OR10J5Q8NHC4 309 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 PGLYRP3Q96LB9 341 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 DERL3Q96Q80 235 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 MS4A6AQ9H2W1 248 aa9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 RBM7Q9Y580 266 aaKnown RBP9.8□□□□□ -0.84
NKX3-1-202ENST00000523261 TMEM14DPA8MWL7 114 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 BTF3P20290 206 aaKnown RBP9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 CALB2P22676 271 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 CRHBPP24387 322 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 ETV1P50549 477 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 RPL8P62917 257 aaKnown RBP9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 QRFPP83859 136 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 PLA2G7Q13093 441 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 TMEM88Q6PEY1 159 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 DGCR14Q96DF8 476 aaKnown RBP9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 ZNF503Q96F45 646 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 OR10C1Q96KK4 312 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 ATP6V0BQ99437 205 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 CMSS1Q9BQ75 279 aaKnown RBP9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 MRPS18AQ9NVS2 196 aaKnown RBP9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 HSF4Q9ULV5 492 aa9.79□□□□□ -0.84
NKX3-1-202ENST00000523261 TRAV2A0A0B4J234 112 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 KNCNA6PVL3 124 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 FOXI3A8MTJ6 420 aaPredicted RBP9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 DNASE2O00115 360 aaPredicted RBP9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 RAB27BO00194 218 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 NUPL2O15504 423 aaKnown RBP9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 HLA-GP17693 338 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 TMEM50BP56557 158 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 OR2B8PP59922 312 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 RPL30P62888 115 aaKnown RBP9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 KCTD9Q7L273 389 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 ATG101Q9BSB4 218 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 LPAR5Q9H1C0 372 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 OAZ3Q9UMX2 235 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 POMPQ9Y244 141 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 MRPS7Q9Y2R9 242 aaKnown RBP9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 PRELID3BQ9Y3B1 194 aa9.78□□□□□ -0.84
NKX3-1-202ENST00000523261 IGHV3-21A0A0B4J1V1 117 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 DIRAS3O95661 229 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 CD5P06127 495 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 HTN3P15516 51 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 C1orf100Q5SVJ3 147 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 TMPRSS11AQ6ZMR5 421 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 LILRB2Q8N423 598 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 FAM89BQ8N5H3 189 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 ZFP41Q8N8Y5 198 aa9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 FGF20Q9NP95 211 aaPredicted RBP9.77□□□□□ -0.85
NKX3-1-202ENST00000523261 TRAV14DV4A0A0A6YYC5 116 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 CTSGP08311 255 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 EMP1P54849 157 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 BRWD1-AS2P59051 145 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 HSP90B2PQ58FF3 399 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 UBE2UQ5VVX9 321 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 OR4S2Q8NH73 311 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 RHOXF1Q8NHV9 184 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 SCARB1Q8WTV0 552 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 ST8SIA2Q92186 375 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 ARHGAP5-AS1Q96IT6 56 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 Q96MT0 163 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 PECRQ9BY49 303 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
NKX3-1-202ENST00000523261 SMR3BP02814 79 aaPredicted RBP9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 TTC23Q5W5X9 447 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 H1FOOQ8IZA3 346 aaPredicted RBP9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 GDPD1Q8N9F7 314 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 C15orf53Q8NAA6 179 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 UBAC2Q8NBM4 344 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms