RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 HRH1P35367 487 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 RORCP51449 518 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 OR2B8PP59922 312 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 ERVK-16P61578 105 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 LYSMD2Q8IV50 215 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 SGPP2Q8IWX5 399 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 CMTM1Q8IZ96 169 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 Q8N1Y9 231 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 Q8N402 240 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 GPX8Q8TED1 209 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 FANCD2OSQ96PS1 177 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 SCPEP1Q9HB40 452 aa12.35□□□□□ -0.43
CLN8-206ENST00000523237 CGB1A6NKQ9 187 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 PPP5D1E7EU14 171 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 GPR31O00270 319 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 GGCTO75223 188 aaKnown RBP12.34□□□□□ -0.43
CLN8-206ENST00000523237 NDUFB8O95169 186 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 REG1AP05451 166 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 F2RP25116 425 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 TSPAN5P62079 268 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 SNX29P2Q8IUI4 249 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 EEF1AKMT3Q96AZ1 226 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
CLN8-206ENST00000523237 KLK9Q9UKQ9 250 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 TENM3Q9P273 2699 aa12.34□□□□□ -0.43
CLN8-206ENST00000523237 TRAV3A0A0B4J244 114 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 MARCH11A6NNE9 402 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 A8MZ25 164 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 HPGDSO60760 199 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 ELK1P19419 428 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 RCVRNP35243 200 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 ARL3P36405 182 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
CLN8-206ENST00000523237 LPCAT3Q6P1A2 487 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 MZT2AQ6P582 158 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 AP3S1Q92572 193 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
CLN8-206ENST00000523237 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 RCHY1Q96PM5 261 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
CLN8-206ENST00000523237 FXYD6Q9H0Q3 95 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 ZMAT4Q9H898 229 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 DMRT1Q9Y5R6 373 aa12.33□□□□□ -0.44
CLN8-206ENST00000523237 IGLV11-55A0A075B6I3 123 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 TRBV7-1A0A0A6YYK4 115 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 FAM25AB3EWG3 89 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 FAM25CB3EWG5 89 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 FAM25GB3EWG6 89 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 GABARAPO95166 117 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 OR2C1O95371 312 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 HLA-AP01891 365 aaKnown RBP12.32□□□□□ -0.44
CLN8-206ENST00000523237 RPA2P15927 270 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 S100GP29377 79 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
CLN8-206ENST00000523237 CLEC19AQ6UXS0 136 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 DYNLRB2Q8TF09 96 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 FCAMRQ8WWV6 532 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 CXorf58Q96LI9 332 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 THYN1Q9P016 225 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 S4R3C0 116 aa12.32□□□□□ -0.44
CLN8-206ENST00000523237 LGALS9O00182 355 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 CYB5BO43169 146 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 SMIM18P0DKX4 95 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 LPAR6P43657 344 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 CTF1Q16619 201 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
CLN8-206ENST00000523237 GPHB5Q86YW7 130 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
CLN8-206ENST00000523237 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
CLN8-206ENST00000523237 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 C2orf70A6NJV1 201 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 KRASP01116 189 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 TRAPPC2P0DI81 140 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 TRAPPC2BP0DI82 140 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 ZNF182P17025 639 aaPredicted RBP12.3□□□□□ -0.44
CLN8-206ENST00000523237 FAM106AQ4KMX7 169 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 ZNF585BQ52M93 769 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 GPR107Q5VW38 600 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 ADAMTSL5Q6ZMM2 481 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 CADM3Q8N126 398 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 OR1L8Q8NGR8 309 aa12.3□□□□□ -0.44
CLN8-206ENST00000523237 THAP7Q9BT49 309 aaPredicted RBP12.3□□□□□ -0.44
CLN8-206ENST00000523237 TEX50A0A1B0GTY4 177 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 MFSD2BA6NFX1 497 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 SNAPC5O75971 98 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 CLEC3BP05452 202 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 FOLR2P14207 255 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 G6PCP35575 357 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 UCP3P55916 312 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 CD300EQ496F6 205 aaPredicted RBP12.29□□□□□ -0.44
CLN8-206ENST00000523237 LAX1Q8IWV1 398 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 SLC38A6Q8IZM9 456 aa12.29□□□□□ -0.44
CLN8-206ENST00000523237 GDPD1Q8N9F7 314 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms