RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 MYOD1P15172 320 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 OR2B8PP59922 312 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 SSBP2P81877 361 aaPredicted RBP9.43□□□□□ -0.9
PVT1-215ENST00000522963 C9orf152Q5JTZ5 239 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 SHISA2Q6UWI4 295 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 HSPB9Q9BQS6 159 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 PRSS22Q9GZN4 317 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 C16orf95Q9H693 158 aa9.43□□□□□ -0.9
PVT1-215ENST00000522963 IGHV7-81A0A0B4J1V7 117 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 SSNA1O43805 119 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 SNAPC5O75971 98 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 GNB1P62873 340 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 RPL8P62917 257 aaKnown RBP9.42□□□□□ -0.9
PVT1-215ENST00000522963 CX3CL1P78423 397 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 NDPQ00604 133 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 C10orf55Q5SWW7 151 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 MMD2Q8IY49 270 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 OR4A16Q8NH70 328 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 WFDC12Q8WWY7 111 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 ZNF702PQ9H963 129 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 CACNG5Q9UF02 275 aa9.42□□□□□ -0.9
PVT1-215ENST00000522963 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 TENM1Q9UKZ4 2725 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 A0A1B0GU03 582 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 LINC01548A6NM66 108 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 C15orf61A6NNL5 157 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 GOSR2O14653 212 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 IFNA21P01568 189 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 SULT1A3P0DMM9 295 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 SULT1A4P0DMN0 295 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 HLA-GP17693 338 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 PROK1P58294 105 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 SMCO1Q147U7 214 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 FXYD3Q14802 87 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 TNXAQ16473 311 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 TMEM95Q3KNT9 176 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 ZNF562Q6V9R5 426 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 FOXRED2Q8IWF2 684 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 OR10C1Q96KK4 312 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 QTRT1Q9BXR0 403 aaKnown RBP9.41□□□□□ -0.9
PVT1-215ENST00000522963 TMEM14BQ9NUH8 114 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
PVT1-215ENST00000522963 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
PVT1-215ENST00000522963 TEX50A0A1B0GTY4 177 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 C13orf42A0A1B0GVH6 325 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 A0A1B0GW64 132 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 CGB1A6NKQ9 187 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 FAM25EA8MYX2 175 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 E7EUB6 86 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 ST8SIA3O43173 380 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 PITX3O75364 302 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 RBMXL2O75526 392 aaKnown RBP9.4□□□□□ -0.9
PVT1-215ENST00000522963 SIX6O95475 246 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 IGHG2P01859 326 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 OPN1MWP04001 364 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 FGF2P09038 288 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 OPN1MW2P0DN77 364 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 OPN1MW3P0DN78 364 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 EGR2P11161 476 aaPredicted RBP9.4□□□□□ -0.9
PVT1-215ENST00000522963 SLC25A6P12236 298 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 MAS1LP35410 378 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
PVT1-215ENST00000522963 KRTAP10-3P60369 221 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 FCN2Q15485 313 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 HIST2H2BDQ6DRA6 164 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 THOC7Q6I9Y2 204 aaKnown RBP9.4□□□□□ -0.9
PVT1-215ENST00000522963 SLC35E3Q7Z769 313 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 Q8N2B8 174 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 KLHDC1Q8N7A1 406 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 MED28Q9H204 178 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.4□□□□□ -0.9
PVT1-215ENST00000522963 COA4Q9NYJ1 87 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 MGAT4CQ9UBM8 478 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 FBXO7Q9Y3I1 522 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 OR51B2Q9Y5P1 312 aa9.4□□□□□ -0.9
PVT1-215ENST00000522963 C5orf51A6NDU8 294 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 ACTL6BO94805 426 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 NXPH3O95157 252 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 CNIH1O95406 144 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 RPL27AP46776 148 aaKnown RBP9.39□□□□□ -0.91
PVT1-215ENST00000522963 HSPE1P61604 102 aaKnown RBP9.39□□□□□ -0.91
PVT1-215ENST00000522963 RRAS2P62070 204 aaPredicted RBP9.39□□□□□ -0.91
PVT1-215ENST00000522963 IAH1Q2TAA2 248 aaPredicted RBP9.39□□□□□ -0.91
PVT1-215ENST00000522963 AARDQ4LEZ3 155 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 GSG1LQ6UXU4 331 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 ZNF429Q86V71 674 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 OR5M8Q8NGP6 311 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 OR1L8Q8NGR8 309 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 OR1S1Q8NH92 325 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 GRPEL2Q8TAA5 225 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 SRSF12Q8WXF0 261 aaKnown RBP9.39□□□□□ -0.91
PVT1-215ENST00000522963 ARPC1AQ92747 370 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 SPIN2AQ99865 258 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 SPIN2BQ9BPZ2 258 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 FAM103A1Q9BTL3 118 aaKnown RBP9.39□□□□□ -0.91
PVT1-215ENST00000522963 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 PARP11Q9NR21 331 aa9.39□□□□□ -0.91
PVT1-215ENST00000522963 FKBP11Q9NYL4 201 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms