RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 OR4X2Q8NGF9 303 aa9.66□□□□□ -0.86
CLK4-208ENST00000520957 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
CLK4-208ENST00000520957 FYTTD1Q96QD9 318 aaKnown RBP9.66□□□□□ -0.86
CLK4-208ENST00000520957 AIFM2Q9BRQ8 373 aa9.66□□□□□ -0.86
CLK4-208ENST00000520957 FAM212BQ9NTI7 297 aaPredicted RBP9.66□□□□□ -0.86
CLK4-208ENST00000520957 ZNF580Q9UK33 172 aa9.66□□□□□ -0.86
CLK4-208ENST00000520957 TEX50A0A1B0GTY4 177 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 NAP1L6A6NFF2 107 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 RBMXL2O75526 392 aaKnown RBP9.65□□□□□ -0.86
CLK4-208ENST00000520957 NDUFB6O95139 128 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 CDS2O95674 445 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 TSPAN15O95858 294 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 PRH1P02810 166 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 PF4V1P10720 104 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 OR2B8PP59922 312 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 ERVK-16P61578 105 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 DEFA5Q01523 94 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 TMEM267Q0VDI3 215 aaPredicted RBP9.65□□□□□ -0.86
CLK4-208ENST00000520957 TMEM187Q14656 261 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 Q6ZRM9 215 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 SGPP2Q8IWX5 399 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 PHB2Q99623 299 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 GON7Q9BXV9 100 aa9.65□□□□□ -0.86
CLK4-208ENST00000520957 WDR12Q9GZL7 423 aaKnown RBP9.65□□□□□ -0.86
CLK4-208ENST00000520957 FOXA2Q9Y261 457 aaPredicted RBP9.65□□□□□ -0.86
CLK4-208ENST00000520957 A0A0B4J293 547 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 CENPXA8MT69 81 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 UPK1BO75841 260 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 P0C879 139 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 AREGP15514 252 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 RPL27AP46776 148 aaKnown RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 RAB9AP51151 201 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 FOXE3Q13461 319 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 RBMS2Q15434 407 aaKnown RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 H2BFWTQ7Z2G1 175 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 SELENOHQ8IZQ5 122 aaKnown RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 OR10W1Q8NGF6 305 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 OR4A5Q8NH83 315 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 FAM110DQ8TAY7 271 aaPredicted RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 OR5B12Q96R08 314 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 TSSC4Q9Y5U2 329 aaPredicted RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 REG1AP05451 166 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 ELANEP08246 267 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 ANXA7P20073 488 aaKnown RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 DHODHQ02127 395 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 PPP1R1AQ13522 171 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 TMEM268Q5VZI3 342 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 SLC25A42Q86VD7 318 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 GALNT14Q96FL9 552 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 DUX3Q96PT4 197 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 SPIN2AQ99865 258 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 SPIN2BQ9BPZ2 258 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
CLK4-208ENST00000520957 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 KCNIP3Q9Y2W7 256 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 OR51B2Q9Y5P1 312 aa9.64□□□□□ -0.87
CLK4-208ENST00000520957 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 CREBL2O60519 120 aaPredicted RBP9.63□□□□□ -0.87
CLK4-208ENST00000520957 SNAPC5O75971 98 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 VAMP1P23763 118 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 SLC6A1P30531 599 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 MAS1LP35410 378 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 RPL23AP62750 156 aaKnown RBP9.63□□□□□ -0.87
CLK4-208ENST00000520957 ANKRD55Q3KP44 614 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 TMEM128Q5BJH2 165 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 CXorf66Q5JRM2 361 aaPredicted RBP9.63□□□□□ -0.87
CLK4-208ENST00000520957 TMEM65Q6PI78 240 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 C8orf86Q6ZUL3 223 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 LYZL2Q7Z4W2 148 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 CENPSQ8N2Z9 138 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 COMMD1Q8N668 190 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 COMMD5Q9GZQ3 224 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 GNB4Q9HAV0 340 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 TMEM14BQ9NUH8 114 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
CLK4-208ENST00000520957 AKR1C2P52895 323 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 ZNF695Q8IW36 515 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 CADM3Q8N126 398 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 SLC35G3Q8N808 338 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 MYOZ3Q8TDC0 251 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 RBPMSQ93062 196 aaKnown RBP9.62□□□□□ -0.87
CLK4-208ENST00000520957 QTRT1Q9BXR0 403 aaKnown RBP9.62□□□□□ -0.87
CLK4-208ENST00000520957 ALX4Q9H161 411 aaPredicted RBP9.62□□□□□ -0.87
CLK4-208ENST00000520957 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 COA4Q9NYJ1 87 aa9.62□□□□□ -0.87
CLK4-208ENST00000520957 TRAV6A0A075B6T7 132 aa9.61□□□□□ -0.87
CLK4-208ENST00000520957 IGLC7A0M8Q6 106 aa9.61□□□□□ -0.87
CLK4-208ENST00000520957 C15orf61A6NNL5 157 aa9.61□□□□□ -0.87
CLK4-208ENST00000520957 M0QZ24 198 aa9.61□□□□□ -0.87
CLK4-208ENST00000520957 B3GALNT1O75752 331 aa9.61□□□□□ -0.87
CLK4-208ENST00000520957 IGHV3-11P01762 117 aa9.61□□□□□ -0.87
CLK4-208ENST00000520957 TCRBP04435 133 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms