RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CASC10Q5T4H9 136 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 CACNG8Q8WXS5 425 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 NEURL2Q9BR09 285 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 TMEM140Q9NV12 185 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 BET1LQ9NYM9 111 aa12.25□□□□□ -0.45
IGHV3-42-201ENST00000520410 C2orf70A6NJV1 201 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 CYB5BO43169 146 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 TNFAIP8O95379 198 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 FOLR2P14207 255 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 RPS19P39019 145 aaKnown RBP12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 RFX2P48378 723 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 HAGHQ16775 308 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 GIMAP1Q8WWP7 306 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 SIGLEC8Q9NYZ4 499 aa12.24□□□□□ -0.45
IGHV3-42-201ENST00000520410 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 UPK2O00526 184 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 TMEM127O75204 238 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CTRB1P17538 263 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 GPR183P32249 361 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 PRSS3P35030 304 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 TAS2R46P59540 309 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 TSPAN5P62079 268 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CMTM1Q8IZ96 169 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CD300LFQ8TDQ1 290 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CXorf58Q96LI9 332 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CCDC140Q96MF4 163 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CITED4Q96RK1 184 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 THYN1Q9P016 225 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 COMMD3Q9UBI1 195 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 CEPT1Q9Y6K0 416 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 SORL1Q92673 2214 aa12.23□□□□□ -0.45
IGHV3-42-201ENST00000520410 IGHV3-35A0A0C4DH35 117 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 SMIM31A0A1B0GVY4 71 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 A0A1B0GW64 132 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 MFSD2BA6NFX1 497 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 A8MZ25 164 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 CD7P09564 240 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 HLA-DMAP28067 261 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 S100GP29377 79 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 OR2B8PP59922 312 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 DEFB125Q8N687 156 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 WDR89Q96FK6 387 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 FANCD2OSQ96PS1 177 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 FAM110AQ9BQ89 295 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 QTRT1Q9BXR0 403 aaKnown RBP12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 WFDC10AQ9H1F0 79 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 SRD5A3Q9H8P0 318 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 RETNQ9HD89 108 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 COMMD9Q9P000 198 aa12.22□□□□□ -0.45
IGHV3-42-201ENST00000520410 TRBV7-1A0A0A6YYK4 115 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 SNAPC5O75971 98 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 CRYGCP07315 174 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 LPAR6P43657 344 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 DEFB114Q30KQ6 69 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 PHLDA2Q53GA4 152 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 RNASE12Q5GAN4 147 aaKnown RBP12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 SLC25A24Q6NUK1 477 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 PLET1Q6UQ28 207 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 SLC16A13Q7RTY0 426 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 SNX29P2Q8IUI4 249 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 OR10W1Q8NGF6 305 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 OR6F1Q8NGZ6 308 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 MOB3AQ96BX8 217 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 YIPF6Q96EC8 236 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 FXYD6Q9H0Q3 95 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 PLEKHA2Q9HB19 425 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 NSG2Q9Y328 171 aa12.21□□□□□ -0.45
IGHV3-42-201ENST00000520410 IGLV11-55A0A075B6I3 123 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 IGHV3-21A0A0B4J1V1 117 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 FAM25AB3EWG3 89 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 FAM25CB3EWG5 89 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 FAM25GB3EWG6 89 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 LGALS9O00182 355 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 SCAF4O95104 1147 aaKnown RBP12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 KRASP01116 189 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 CLEC3BP05452 202 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 EIF4EP06730 217 aaKnown RBP12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 TRAPPC2P0DI81 140 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 TRAPPC2BP0DI82 140 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 OR13C7P0DN81 318 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 CBLN1P23435 193 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 GNRHRP30968 328 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 HRH1P35367 487 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 G6PCP35575 357 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 ZNF57Q68EA5 555 aaPredicted RBP12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 ADAMTSL5Q6ZMM2 481 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 LAX1Q8IWV1 398 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 UBAC2Q8NBM4 344 aa12.2□□□□□ -0.46
IGHV3-42-201ENST00000520410 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms