RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 ZNF773Q6PK81 442 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 SLC35F2Q8IXU6 374 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 VKORC1L1Q8N0U8 176 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 STX19Q8N4C7 294 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 ANKRD42Q8N9B4 389 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 GALMQ96C23 342 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 CMTM3Q96MX0 182 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 CLUHP3Q96NS8 147 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 NIPSNAP1Q9BPW8 284 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 ADI1Q9BV57 179 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 MLST8Q9BVC4 326 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 RAB9BQ9NP90 201 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 TRAV14DV4A0A0A6YYC5 116 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 ZNF705GA8MUZ8 300 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 MCRIP1C9JLW8 97 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 ZNF701M0R085 212 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 ITGB1BP1O14713 200 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 ST8SIA3O43173 380 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 CCNKO75909 580 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 IGKV3-20P01619 116 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 HBE1P02100 147 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 OCM2P0CE71 109 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 OCMP0CE72 109 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 PTMSP20962 102 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 SMIM11AP58511 58 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 OR5I1Q13606 314 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 GINS1Q14691 196 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 CDK10Q15131 360 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 MPV17LQ2QL34 196 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 PSMG4Q5JS54 123 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 ZNF554Q86TJ5 538 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 IFT20Q8IY31 132 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 DUSP18Q8NEJ0 188 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 BSCL2Q96G97 398 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 TBX5Q99593 518 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 PAXXQ9BUH6 204 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 SLC35B3Q9H1N7 401 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 IL36GQ9NZH8 169 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 CACNG5Q9UF02 275 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 PEX16Q9Y5Y5 336 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 TMEM14AQ9Y6G1 99 aa4.36□□□□□ -1.71
CTNNA1-216ENST00000519489 IGKV1-6A0A0C4DH72 117 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 EBAG9O00559 213 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 MRASO14807 208 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 CRYZL1O95825 349 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 UBCP0CG48 685 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 HIST1H1BP16401 226 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 SERPINA2P20848 420 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 RPL27AP46776 148 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 RRN3P1Q2M238 152 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 VMA21Q3ZAQ7 101 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 OGFRL1Q5TC84 451 aaPredicted RBP4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 TMEM236Q5W0B7 351 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 MMD2Q8IY49 270 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 STXBP6Q8NFX7 210 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 OR2G2Q8NGZ5 317 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 VN1R17PQ8TDU5 208 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 FAM162AQ96A26 154 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 PTX4Q96A99 478 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 PPP1R14BQ96C90 147 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 FAM192AQ9GZU8 254 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 IL1RAPQ9NPH3 570 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 SDHAF2Q9NX18 166 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 KCNIP1Q9NZI2 227 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 STEAP1Q9UHE8 339 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 GMPPBQ9Y5P6 360 aa4.35□□□□□ -1.71
CTNNA1-216ENST00000519489 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 IGLC7A0M8Q6 106 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 DPPA5A6NC42 116 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 METTL15A6NJ78 407 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 K7EIM0 57 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 RAB27BO00194 218 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 SOCS1O15524 211 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 ATP8B1O43520 1251 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 YIF1AO95070 293 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 GYPEP15421 78 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 M6PRP20645 277 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 CAPGP40121 348 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 CEACAM6P40199 344 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 TNFAIP8L3Q5GJ75 292 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 TMED4Q7Z7H5 227 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 SCARB1Q8WTV0 552 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 IL4I1Q96RQ9 567 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 CLN6Q9NWW5 311 aa4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 V9GYY5 206 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-216ENST00000519489 NEBP20929 6669 aa4.34□□□□□ -1.72
CTNNA1-216ENST00000519489 ZNF670-ZNF695F2Z2N8 137 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 M0R129 80 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 LECT2O14960 151 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 DEFA4P12838 97 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 HLA-DRB4P13762 266 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 PSMD7P51665 324 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 CCR9P51686 369 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 NUTF2P61970 127 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 CDK5Q00535 292 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 TP53I3Q53FA7 332 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 TMEM244Q5VVB8 128 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms