RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 VPREB3Q9UKI3 123 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 URGCP-MRPS24S4R325 110 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 SPTY2D1-AS1A0A0U1RR47 76 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 A0A1B0GW15 77 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 PGPA6NDG6 321 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 ERICH4A6NGS2 130 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 DEFB108AA8MXU0 73 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 H3BP45 60 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 PSMD11O00231 422 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 PLPP3O14495 311 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 LECT2O14960 151 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 EEF1E1O43324 174 aaKnown RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 ENSAO43768 121 aaKnown RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 SPOPO43791 374 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 PDCD6O75340 191 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 RAB36O95755 333 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 CST4P01036 141 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 PSKH1P11801 424 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 CCNOP22674 350 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 NUP62P37198 522 aaPredicted RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 AQP5P55064 265 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 STX4Q12846 297 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 ZBTB6Q15916 424 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 C10orf91Q5T1B1 145 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 AADACL4Q5VUY2 407 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 RBM45Q8IUH3 476 aaKnown RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 SBSPONQ8IVN8 264 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 ST13P4Q8IZP2 240 aaPredicted RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 SIGLECL1Q8N7X8 197 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 HIST1H2BAQ96A08 127 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 ZNF625Q96I27 306 aaPredicted RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 OLFM3Q96PB7 478 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 LINC01587Q99440 93 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 CIB1Q99828 191 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 COPS4Q9BT78 406 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 SUCNR1Q9BXA5 334 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 ARL6Q9H0F7 186 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 HAUS4Q9H6D7 363 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 VCX3AQ9NNX9 186 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 DNAJC27Q9NZQ0 273 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 MRM2Q9UI43 246 aaKnown RBP0.98□□□□□ -2.25
SKP1-205ENST00000519054 SPTBP11277 2137 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 KIAA2026Q5HYC2 2103 aa0.98□□□□□ -2.25
SKP1-205ENST00000519054 EXPH5Q8NEV8 1989 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 IGHV1-45A0A0A0MS14 117 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 TRAV8-3A0A0A6YYJ7 113 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 TRAV17A0A0B4J275 112 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 GOLGA6L10A6NI86 522 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 ODF3BA8MYP8 253 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 C9J4A7 227 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 C8orf87E5RJ46 101 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 GOLGA6L19H0YKK7 550 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 TMEM250H0YL14 139 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 H3BRN7 92 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 M0QXV9 152 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 ZNF189O75820 626 aaPredicted RBP0.97□□□□□ -2.25
SKP1-205ENST00000519054 EPPINO95925 133 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 S100A9P06702 114 aaKnown RBP0.97□□□□□ -2.25
SKP1-205ENST00000519054 MAGEA3P43357 314 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 RANBP1P43487 201 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 KCNJ3P48549 501 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 TTPAP49638 278 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 ETV1P50549 477 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 OR10A3P58181 314 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 CEACAM21Q3KPI0 293 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 NXNL2Q5VZ03 156 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 ELP2Q6IA86 826 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 CLEC20AQ6ZU45 233 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 GRINAQ7Z429 371 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 FER1L6-AS1Q8NA97 138 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 OR11G2Q8NGC1 345 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 OR4K17Q8NGC6 315 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 DDIT4LQ96D03 193 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 DNAJC30Q96LL9 226 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 SIKE1Q9BRV8 207 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 XKR8Q9H6D3 395 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 SCN3AQ9NY46 2000 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 MYH4Q9Y623 1939 aa0.97□□□□□ -2.25
SKP1-205ENST00000519054 MYO5AQ9Y4I1 1855 aaKnown RBP0.97□□□□□ -2.25
SKP1-205ENST00000519054 EML6Q6ZMW3 1958 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 IGHV2-26A0A0B4J1V2 119 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 A0A1W2PQL4 384 aaPredicted RBP0.96□□□□□ -2.26
SKP1-205ENST00000519054 IGKV2-29A2NJV5 120 aaPredicted RBP0.96□□□□□ -2.26
SKP1-205ENST00000519054 CLPSL1A2RUU4 121 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 F8VP50 259 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 TRAPPC3O43617 180 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 SOX14O95416 240 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 GYPCP04921 128 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 CCDC172P0C7W6 258 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 SLC25A16P16260 332 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 ELK4P28324 431 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 CRABP1P29762 137 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 HADHBP55084 474 aaKnown RBP0.96□□□□□ -2.26
SKP1-205ENST00000519054 DSTNP60981 165 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 TNNC1P63316 161 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 CD164Q04900 197 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 TRAM1Q15629 374 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 ZCWPW2Q504Y3 356 aa0.96□□□□□ -2.26
SKP1-205ENST00000519054 HBMQ6B0K9 141 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms