RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SIGLEC5O15389 551 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SSSCA1O60232 199 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 NXPH2O95156 264 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 PTBP3O95758 552 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 TMEM50AO95807 157 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 OR2H2O95918 312 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 TSHBP01222 138 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 IFNA1P01562 189 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 IGHV3-9P01782 118 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 S100A6P06703 90 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 P0C879 139 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SMIM6P0DI80 62 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 PSG2P11465 335 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 CCL2P13500 99 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 IGHV1-2P23083 117 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 NFYBP25208 207 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 PPP1CCP36873 323 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 CFHR2P36980 270 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 MEOX2P50222 304 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 TNFSF10P50591 281 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 NOVA1P51513 510 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 ARG2P78540 354 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 HTD2P86397 168 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 PSG7Q13046 419 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 ZNF154Q13106 437 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 EIF4EBP1Q13541 118 aaPredicted RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 TMEM249Q2WGJ8 235 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 AARDQ4LEZ3 155 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 HES3Q5TGS1 186 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 C9orf135Q5VTT2 229 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 FAM53AQ6NSI3 398 aaPredicted RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 TMEM14EPQ6UXP3 125 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 LINC00696Q6ZRV3 163 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 RBPMS2Q6ZRY4 209 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 ZNF645Q8N7E2 425 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 CLDND2Q8NHS1 167 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 FAM213BQ8TBF2 198 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SLC25A40Q8TBP6 338 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SCGB1C1Q8TD33 95 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 CD300LFQ8TDQ1 290 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SFT2D1Q8WV19 159 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 RDH5Q92781 318 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 TAF15Q92804 592 aaKnown RBP eCLIP3.04□□□□□ -1.92
CAST-242ENST00000515063 GALMQ96C23 342 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 TVP23CQ96ET8 276 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 YPEL4Q96NS1 127 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 CIB3Q96Q77 187 aaPredicted RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 TAAR6Q96RI8 345 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 SSX3Q99909 188 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 ADAT1Q9BUB4 502 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 HES7Q9BYE0 225 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SH3BGRL3Q9H299 93 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 SAV1Q9H4B6 383 aaPredicted RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 RAB9BQ9NP90 201 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 RPS10P5Q9NQ39 176 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 PSENENQ9NZ42 101 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 METTL1Q9UBP6 276 aaKnown RBP3.04□□□□□ -1.92
CAST-242ENST00000515063 TRAPPC2LQ9UL33 140 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 FBXO7Q9Y3I1 522 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 LIPGQ9Y5X9 500 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 DNAJC13O75165 2243 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 CACNA1BQ00975 2339 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 ZNF407Q9C0G0 2248 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 H3BQ15 152 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 M0R036 132 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 AGPAT2O15120 278 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 ATP6V0E1O15342 81 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 RBFOX2O43251 390 aaKnown RBP eCLIP3.03□□□□□ -1.92
CAST-242ENST00000515063 MPDU1O75352 247 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 CEACAM4O75871 244 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 CST7O76096 145 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 HAND1O96004 215 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 F10P00742 488 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 IGKV1-39P01597 117 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 IGKV1-5P01602 117 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 IGHV2-70P01814 119 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 IGHV2-5P01817 119 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 IGKV1D-39P04432 117 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 S100A9P06702 114 aaKnown RBP3.03□□□□□ -1.92
CAST-242ENST00000515063 IRF2P14316 349 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 RAB5AP20339 215 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 GZMHP20718 246 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 MC5RP33032 325 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 CEACAM6P40199 344 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 KIR2DS2P43631 304 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 RND2P52198 227 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 GNB2P62879 340 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 RBPJQ06330 500 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 P2RY6Q15077 328 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 TGIF1Q15583 401 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 SSX2Q16385 188 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 VWC2Q2TAL6 325 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 SMIM21Q3B7S5 101 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 DNLZQ5SXM8 178 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 SLC25A24Q6NUK1 477 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 ACP7Q6ZNF0 438 aa3.03□□□□□ -1.92
CAST-242ENST00000515063 SSX8Q7RTT4 187 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms