RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MYH10P35580 1976 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 CD24P25063 80 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 MEF2BQ02080 365 aaPredicted RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 GFI1BQ5VTD9 330 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 OR10D4PQ8NGN7 298 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 RPS19P39019 145 aaKnown RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 RAE1P78406 368 aaKnown RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 HMGCLL1Q8TB92 370 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 ORAOV1Q8WV07 137 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 ZNF503Q96F45 646 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 C18orf15Q96N68 181 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 GDF15Q99988 308 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 ZIC3O60481 467 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 NDUFB6O95139 128 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 TYMSP04818 313 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 PTGDSP41222 190 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 LIMS1P48059 325 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 TIRAPP58753 221 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 TMEM187Q14656 261 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 MIC13Q5XKP0 118 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
VCAN-208ENST00000512590 ZNF446Q9NWS9 450 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 SOCS1O15524 211 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 GLIPR1P48060 266 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FOXL2P58012 376 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 IL17RELQ6ZVW7 336 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 SLC25A45Q8N413 288 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 PKIBQ9C010 78 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 PDFQ9HBH1 243 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FMN2Q9NZ56 1722 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 MUC21A0A0G2JKD1 596 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 MUC21A0A140T8X8 626 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FAM27BQ5VT28 67 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 OR10S1Q8NGN2 331 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 ZNF721Q8TF20 911 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 EMCNQ9ULC0 261 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FUT9Q9Y231 359 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 PCM1Q15154 2024 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 MPTX1A8MV57 137 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FCN3O75636 299 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 BAK1Q16611 211 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 CYP2G1PQ6ZSU1 146 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FAM216BQ8N7L0 139 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 FIZ1Q96SL8 496 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 NDUFS8O00217 210 aa7.54□□□□□ -1.2
VCAN-208ENST00000512590 POLR2IP36954 125 aaKnown RBP7.54□□□□□ -1.2
VCAN-208ENST00000512590 SEC61GP60059 68 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 FOXL1Q12952 345 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 LINC00303Q3SY05 128 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 C8orf82Q6P1X6 216 aaPredicted RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 TMEM144Q7Z5S9 345 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 C5orf30Q96GV9 206 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 IL20Q9NYY1 176 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 C7orf77A4D0Y5 90 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 AMBPP02760 352 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 GVQW1Q8N7I0 195 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 LINC01555Q8NAE3 123 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 IGKV1D-42A0A075B6H8 117 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 TRAV2A0A0B4J234 112 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 UPK2O00526 184 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 GATA3P23771 443 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 TMEM249Q2WGJ8 235 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 FAM201AQ5SY85 155 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 OR4D11Q8NGI4 311 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 N4BP2Q86UW6 1770 aaPredicted RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 IGHV3-64A0A075B6Q5 118 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 IGKV1D-12P01611 117 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 FABP5Q01469 135 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 SRSF1Q07955 248 aaKnown RBP eCLIP7.53□□□□□ -1.2
VCAN-208ENST00000512590 ORMDL2Q53FV1 153 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 ALG14Q96F25 216 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 ZAR1LA6NP61 321 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 CECR9P0C854 216 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 PLNP26678 52 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 NPC2P61916 151 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 SURF2Q15527 256 aaPredicted RBP7.53□□□□□ -1.2
VCAN-208ENST00000512590 ZNF506Q5JVG8 444 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 ABLIM2Q6H8Q1 611 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 RIMKLAQ8IXN7 391 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 ZNF680Q8NEM1 530 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 COX14Q96I36 57 aa7.53□□□□□ -1.2
VCAN-208ENST00000512590 MYO5BQ9ULV0 1848 aa7.52□□□□□ -1.2
VCAN-208ENST00000512590 A0A1W2PP11 408 aa7.52□□□□□ -1.21
VCAN-208ENST00000512590 OR9G9P0C7N8 305 aa7.52□□□□□ -1.21
VCAN-208ENST00000512590 OTX1P32242 354 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms