RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 OR2B8PP59922 312 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 GNB2P62879 340 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 MRPS11P82912 194 aaKnown RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 FLI1Q01543 452 aaPredicted RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 AKR1C1Q04828 323 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 BSPH1Q075Z2 132 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 EIF4EBP1Q13541 118 aaPredicted RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 OR2B11Q5JQS5 317 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 ADAM5Q6NVV9 412 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 FAM71F2Q6NXP2 309 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 BTNL3Q6UXE8 466 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 TMEM14EPQ6UXP3 125 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 PUSL1Q8N0Z8 303 aaKnown RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 ZNRF1Q8ND25 227 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 NEIL1Q96FI4 390 aaPredicted RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 P2RX4Q99571 388 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 TMEM204Q9BSN7 226 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 WDR61Q9GZS3 305 aaKnown RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 SH3BGRL3Q9H299 93 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 SLC25A10Q9UBX3 287 aaPredicted RBP7.81□□□□□ -1.16
MSH3-203ENST00000512531 MLXQ9UH92 298 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 PRNDQ9UKY0 176 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
MSH3-203ENST00000512531 ABCA1O95477 2261 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 hCG_1809904A0A1W2PP81 198 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 A0A1W2PPE2 198 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 A0A1W2PR64 198 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 A0A1W2PRV1 198 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 C17orf98A8MV24 154 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 CYB5R3P00387 301 aaPredicted RBP7.8□□□□□ -1.16
MSH3-203ENST00000512531 NFYBP25208 207 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 PAX6P26367 422 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 HOXA1P49639 335 aaPredicted RBP7.8□□□□□ -1.16
MSH3-203ENST00000512531 EFNB3Q15768 340 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 ADIPOQQ15848 244 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 HFEQ30201 348 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 ACOT6Q3I5F7 207 aaPredicted RBP7.8□□□□□ -1.16
MSH3-203ENST00000512531 NCR3LG1Q68D85 454 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 OR8G2PQ6IF36 304 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 C5orf24Q7Z6I8 188 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 ZNF429Q86V71 674 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 ZNF525Q8N782 197 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 TPRX1Q8N7U7 411 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 C15orf54Q8N8G6 183 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 OR10G4Q8NGN3 311 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 TAF15Q92804 592 aaKnown RBP eCLIP7.8□□□□□ -1.16
MSH3-203ENST00000512531 ZNF714Q96N38 554 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 GAFA1Q96PS6 74 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 ACTR3CQ9C0K3 210 aaPredicted RBP7.8□□□□□ -1.16
MSH3-203ENST00000512531 TMEM231Q9H6L2 316 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 LINC00574Q9H8X3 128 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 HEYLQ9NQ87 328 aaPredicted RBP7.8□□□□□ -1.16
MSH3-203ENST00000512531 SLC39A9Q9NUM3 307 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 FAM96BQ9Y3D0 163 aa7.8□□□□□ -1.16
MSH3-203ENST00000512531 UBE2L5PA0A1B0GUS4 154 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 DPRXA6NFQ7 191 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 B4DEV8 164 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 RAMP3O60896 148 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 IFNA10P01566 189 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 GYPAP02724 150 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 P0C879 139 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 FGF7P21781 194 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 RAB13P51153 203 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 ATP5J2P56134 94 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 LOXL3P58215 753 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 RPL30P62888 115 aaKnown RBP7.79□□□□□ -1.16
MSH3-203ENST00000512531 RPL31P62899 125 aaKnown RBP7.79□□□□□ -1.16
MSH3-203ENST00000512531 KRTAP1-1Q07627 177 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 PNRC1Q12796 327 aaPredicted RBP7.79□□□□□ -1.16
MSH3-203ENST00000512531 PMS2P11Q13670 270 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 AARDQ4LEZ3 155 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
MSH3-203ENST00000512531 ZNF506Q5JVG8 444 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 NCMAPQ5T1S8 102 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 Q6ZRM9 215 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 C8orf31Q8N9H6 132 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 DEFB108BQ8NET1 73 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 VSTM2AQ8TAG5 236 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 NANPQ8TBE9 248 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 BSCL2Q96G97 398 aaPredicted RBP7.79□□□□□ -1.16
MSH3-203ENST00000512531 CCL13Q99616 98 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 NIPSNAP3BQ9BS92 247 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 AGMATQ9BSE5 352 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 PARP12Q9H0J9 701 aaKnown RBP7.79□□□□□ -1.16
MSH3-203ENST00000512531 TUBA4BQ9H853 241 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 RPS10P5Q9NQ39 176 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 MANBALQ9NQG1 85 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 TMEM106BQ9NUM4 274 aa7.79□□□□□ -1.16
MSH3-203ENST00000512531 KIAA2026Q5HYC2 2103 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 CTXND1A0A1B0GTU2 59 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 TMEM178BH3BS89 294 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 OVOL3O00110 214 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 DNASE2O00115 360 aaPredicted RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 HMGB3O15347 200 aaKnown RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 PPIHO43447 177 aaKnown RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 FSTL3O95633 263 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 TMEM50AO95807 157 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms